Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00216 ATGGAATCCTCGCCTGCCATTCGTTCCTTTCACTATCCCATGGGCACTATGTCCCATGTGCGAGCCTGCCTTGAGAAGCAAGCTGTACTTCCCATCCATAATGCCAGATGGAACTCTAAACGTAGGCTTTTCATCCAGCATTTGGCATATGGTCAGAAGCACATTAATTCCCACATGAAGGGGAAAAGCGCACTAGTTTCATCTGCAAAAACAGCTGAAGCTATCAACACATCCAATTCTGATGCTTCTTCAGATAACACCCCCCAAGGCTCATTGGAGAAAAAGCCTTTGCAAACTGCTACTTTTCCTAATGGATTTGAGGCTTTGGTATTAGAGGTCTGTGATGAGACTGAAATTGCTGAACTGAAAGTAAAGGTTGGAGATTTTGAAATGCATATTAAGCGAAACATTGGAGCAACAAAGGTTCCTTTGTCTAACATTTCACCAACTACACCACCACCTATCCCAAGTAAACCTATGGATGAATCAGCACCCAATAGCCTGCCACCATCACCACCAAAATCATCTCCTGAAAAGAACAACCCATTTGCAAATGTTTCCAAAGAGAAATCACCAAAATTGGCAGCATTGGAGGCTTCTGGGACCAATACCTATGTCTTAGTAACATCTCCCACGGTTGGCTTATTCCGAAGAGGTAGAACAGTGAAAGGGAAGAAGCAACCTCCTATCTGTAAAGAGGGTGATGTAATCAAAGAAGGGCAAGTCATAGGGTATTTGGATCAGTTTGGCACTGGACTTCCTATAAGGTCTGATGTGGCTGGAGAAGTGTTGAAGCTACTTGTTGAGGATGGAGAGCCTGTTGGTTATGGAGACCGTCTTATTGCTGTCTTGCCTTCTTTTCATGATATCAAGTGA 876 0.4372 MESSPAIRSFHYPMGTMSHVRACLEKQAVLPIHNARWNSKRRLFIQHLAYGQKHINSHMKGKSALVSSAKTAEAINTSNSDASSDNTPQGSLEKKPLQTATFPNGFEALVLEVCDETEIAELKVKVGDFEMHIKRNIGATKVPLSNISPTTPPPIPSKPMDESAPNSLPPSPPKSSPEKNNPFANVSKEKSPKLAALEASGTNTYVLVTSPTVGLFRRGRTVKGKKQPPICKEGDVIKEGQVIGYLDQFGTGLPIRSDVAGEVLKLLVEDGEPVGYGDRLIAVLPSFHDIK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00216 291 PANTHER IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED 1 291 - -
Gma18g00216 291 MobiDBLite consensus disorder prediction 147 177 - -
Gma18g00216 291 CDD biotinyl_domain 208 283 - -
Gma18g00216 291 PANTHER BIOTIN/LIPOYL ATTACHMENT DOMAIN PROTEIN 1 291 - -
Gma18g00216 291 SUPERFAMILY Single hybrid motif 200 282 IPR011053 -
Gma18g00216 291 MobiDBLite consensus disorder prediction 142 190 - -
Gma18g00216 291 MobiDBLite consensus disorder prediction 76 98 - -
Gma18g00216 291 Pfam Biotin-requiring enzyme 223 281 IPR000089 -
Gma18g00216 291 Gene3D - 204 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00216 Gma-Chr18 1724524 1731186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00216 110 285 Acyl Lipid Metabolism Gene Families AT5G15530 25.424 5.29e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00216 - - gmx:100792471 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00216 18 1724524 1731186 Gma18g00216 18 1724524 1731186 ECH
Gma18g00216 18 1724524 1731186 Gma11g02359 11 38991231 38997904 GST