Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00215 ATGAAGCCCCACACTCCGGCTTCTTCTTTCGTCACTCGTCTCCCGCACGTGCCTTACTTCCGCGGCGCCACTGCCGCACGTGCCGCGCCACCGGACCCTCCTCATGACGCCCCCGGAGGCCTCGAATTCCGCCGCGTCTCGACCGCCAAACGCCGCCGCGTCAGCCTTTCCGTCTGCCACGCGACTCGCGTCACCGCCGCCTCGAATCCCGGTGGTTCTGACGGCGACGGCGATACTCGAGCTCGGAGCAGCCGGCGCGGCGTGCTGATGGCGCCGTTCTTAGTCGCCGGCGCATCAATCCTGCTCTCGGCGGCGACGGCGAGGGCGGAGGAGAAGGCAGCGGAATCTCCTCTGGCTTCGGCGCCGAAGCCGGAGGAGCCGCCGAAGAAGAAGGAGGAGGAGGAAGTGATAACTTCGAGGATTTACGACGCGACGGTGATAGGAGAACCGTTGGCGATAGGGAAAGAGAAAGGGAAAGTGTGGGAGAAGTTGATGAATGCTCGAGTGGTGTATTTAGGTGAAGCAGAGCAAGTTCCGGTTCGAGACGATAGGGAATTGGAGCTTGAGATTGTGAAGAATTTGCATAGGCGCTGTTTGGAGAAGGAAAAACTATTGTCTCTGGCGCTTGAAGTTTTTCCCGCTAATATTCAGGAACCGCTCAATCAGTATATGGATAAGAAGATAGATGGAGACACCTTGAAGTCTTACACGTTGCATTGGCCGCCTCAAAGATGGCAGGAGTATGAACCTATTCTGAGCTACTGTCGCGAAAATGGAATTCATCTTGTTGCTTGTGGTACACCACTGAAGATCTTAAGAACTGTCCAAGCAGAAGGAATTCGTGGGCTTACAAAGGATGAACGTAAACTATATGCACCTCCAGCTGGTTCAGGCTTCATATCTGGCTTTACTTCTATCTCACGCAGATCTTCTGTTGATAGTACTCAAAATCTGTCTATTCCTTTTGGTCCAAGCTCATACCTTTCTGCACAGGCTCGAGTTGTTGATGAGTATTCTATGTCCCAGATTGTCTTACAAAATGTGCTTGATGGAGGGGTCACTGGTATGTTAATAGTTGTCACTGGTGCAAGCCATGTTACATATGGATCTAGAGGAACTGGAGTGCCAGCAAGAATTTCAGGAAAAATACAAAAGAAAAACCATGCAGTTATATTACTTGACCCTGAAAGACAATTCATTCGCAGAGAAGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCTGCGAGACCCTGTAGTAGAAATTGCTTTGACCGTGCTGAGATTGCTCGGGTTATGAATGCTGCTGGGCGGAGGCGAGATGCCCTCCCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCACCAGAGGTATTGCAGAACTTCTTTGATCTAGAGCAGTATCCTCTAATTTCAGAGCTCACTCACCGTTTCCAGGGATTCAGGGAAAGATTGTTGGCAGATCCCAAATTCTTGCACAGATTAGCCATAGAAGAAGCTATATCAATAACAACTACATTATTGGCACAGTATGAAAAGCGGAAAGAAAATTTTTTCCAAGAGATTGACTATGTTATTACGGACACTGTCAGAGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCAACTTTGTCATTCCTTTCATATGCTGATGAGATGAAAGCACCCGACAACATTGGTTCTCTAATGGGACTTCTTGGCTCCATCCCGGACAATGCATTTCAAAAGAATCCAGCAGGGATAAACTGGAATCTCAATCATAGGATTGCATCAGTTGTATTTGGTGGTTTAAAACTTGCTAGTGTTGGATTTATTTCAAGCATAGGAGCTGTGGCTTCATCAAATTCTCTATATGCAATTCGTAAAGTCCTTAATCCAGCAGTTGTCACTGAACAACGGATTATGAGGTCCCCAATACTCAAAACTGCATTTATATATGCATGCTTTCTTGGAATATCTGCAAATCTCCGTTATCAGCAGATAATTGCTGGGATAGTGGAGCATCGGATTTCTGAACAGTTTGCTTCTCAAACATTCTTTGTAAATATGCTTTCTTTTGTAGCACGGACAGTCAATTCATATTGGGGAACCCAGCAATGGATTGACCTAGCGCGCTTTACTGGCCTACAAGTTAGAAAGACAGAGCCATCAGCATCAGATCCTCCGAATCCTTCTGCAATTTTATGCAACGAAACAGAAGAAGCCAGCATTGATGAGAGAGAAAAATAA 2247 0.4695 MKPHTPASSFVTRLPHVPYFRGATAARAAPPDPPHDAPGGLEFRRVSTAKRRRVSLSVCHATRVTAASNPGGSDGDGDTRARSSRRGVLMAPFLVAGASILLSAATARAEEKAAESPLASAPKPEEPPKKKEEEEVITSRIYDATVIGEPLAIGKEKGKVWEKLMNARVVYLGEAEQVPVRDDRELELEIVKNLHRRCLEKEKLLSLALEVFPANIQEPLNQYMDKKIDGDTLKSYTLHWPPQRWQEYEPILSYCRENGIHLVACGTPLKILRTVQAEGIRGLTKDERKLYAPPAGSGFISGFTSISRRSSVDSTQNLSIPFGPSSYLSAQARVVDEYSMSQIVLQNVLDGGVTGMLIVVTGASHVTYGSRGTGVPARISGKIQKKNHAVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITTTLLAQYEKRKENFFQEIDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADEMKAPDNIGSLMGLLGSIPDNAFQKNPAGINWNLNHRIASVVFGGLKLASVGFISSIGAVASSNSLYAIRKVLNPAVVTEQRIMRSPILKTAFIYACFLGISANLRYQQIIAGIVEHRISEQFASQTFFVNMLSFVARTVNSYWGTQQWIDLARFTGLQVRKTEPSASDPPNPSAILCNETEEASIDEREK 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00215 748 Pfam Haem-binding uptake, Tiki superfamily, ChaN 160 379 IPR007314 -
Gma18g00215 748 SUPERFAMILY EreA/ChaN-like 159 415 - -
Gma18g00215 748 Pfam Protein RETICULATA-related 486 671 IPR021825 -
Gma18g00215 748 MobiDBLite consensus disorder prediction 720 748 - -
Gma18g00215 748 MobiDBLite consensus disorder prediction 113 135 - -
Gma18g00215 748 Gene3D - 150 313 - -
Gma18g00215 748 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 44 747 - -
Gma18g00215 748 MobiDBLite consensus disorder prediction 720 736 - -
Gma18g00215 748 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 44 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00215 Gma-Chr18 1713462 1721023 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00215 - - gmx:100790538 1395.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00215 18 1713462 1721023 Gma18g00215 18 1713462 1721023 ECH
Gma18g00215 18 1713462 1721023 Gma11g02360 11 39003363 39010095 GST