Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00214 ATGTCAACCTCATCCTCTTCCCAAAGCCTCaaaattggcatagttggattcggcaactttggccagtttctggccaagacaatgataaaacaaggccaCACTCTCACAGCAACTTCTCGATCTGATTACTCTGAACTTTGTCTCCAAATGGGCATCCATTTTTTCAGGGATGTCAGCGCATTCCTTACCGCGGACATAGATGTCATAGTGTTGTGCACATCGATATTATCGCTATCCGAGGTTGTCGGGTCAATGCCACTCACCTCCCTGAAGCGACCAACGCTCtttgttgatgttctttctgtcaaagagcacccaagagagcttctactgcgagagttgccagaggattcggacatactctgcacgcacccaatgtttggtcctcagactgccaagaatggatggacagatcacactttcatgtatgacaaagttcggataagagacgaagcTACCTGCTCTAATTTCATCCAAATTTTTGCTACTGAGGGTTGCAAGATGGTACAGATGTCCTGTGAGGAACATGACAGAGCAGCTGCTAAGAGCCAATTTATCACTCACACAATTGGCAGGACACTGGGAGAAATGGATATTCAATCCACACCTATTGACACTAAGGGCTTCGAGACACTTGTTAAATTGAAGGAGACGATGATGAGAAATAGTTTTGATTTGTATAGTGGATTATTCGTGTATAACAGATTCGCCAGACAAGAGCTGGAAAACCTTGAACATGCCTTGCACAAAGTCAAAGAAACGCTGATGATACAAAGGACGAATGGGGAGCAGGGTCATAAAAGAACTGAAAGTTGA 816 0.3125 MSTSSSSQSLKIGIVGFGNFGQFLAKTMIKQGHTLTATSRSDYSELCLQMGIHFFRDVSAFLTADIDVIVLCTSILSLSEVVGSMPLTSLKRPTLFVDVLSVKEHPRELLLRELPEDSDILCTHPMFGPQTAKNGWTDHTFMYDKVRIRDEATCSNFIQIFATEGCKMVQMSCEEHDRAAAKSQFITHTIGRTLGEMDIQSTPIDTKGFETLVKLKETMMRNSFDLYSGLFVYNRFARQELENLEHALHKVKETLMIQRTNGEQGHKRTES 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00214 271 Pfam Prephenate dehydrogenase, nucleotide-binding domain 26 130 IPR046826 -
Gma18g00214 271 Gene3D - 1 177 - -
Gma18g00214 271 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 172 256 IPR008927 -
Gma18g00214 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 171 IPR036291 -
Gma18g00214 271 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 10 271 IPR003099 GO:0004665|GO:0006571|GO:0008977
Gma18g00214 271 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 3 268 - -
Gma18g00214 271 Coils Coil 234 261 - -
Gma18g00214 271 PANTHER AROGENATE DEHYDROGENASE-RELATED 3 268 IPR045011 GO:0006571|GO:0033730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00214 Gma-Chr18 1710640 1712629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00214 K15227 - gmx:100787362 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00214 18 1710640 1712629 Gma18g00214 18 1710640 1712629 ECH
Gma18g00214 18 1710640 1712629 Gma11g02361 11 39010159 39012567 GST