Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00159 ATGGGAAAAAGACAATCTTTGCGCAACAAAGCCACCCACCTTGTTTCTGTCCTTCTCAACCCCATCTCCGATTCCGACACTTCCAATCCCAAAACCTCCAAACAACACCCACCAGCACCAACACCTACACCTCCTTCCGGACAAGTAGGTGGATCAGAGACAAATGATGAAGAGGGTAACCGTGGTTTAGTTGATGGGCCTGATACTTCATCCTTCACTGCGTTCCTCTATTCCTTATTGTCTTCCTCTGACACTGGAGATAATGCAAACTCACGCGTGCAGAGTGATGATAATAAATCTGCTGCACCTGATCACAACCCTTTACCAGACTCATCATCGCTGAAGGAAAATGGTGGGAGGAAGAGTTTGATTTCTAGAAGCAAGCAATCAATTGGTAAGGCTATTCGCAGAATTGGTGGATTTCGCCATCAGGATCGCAGGGATAATGTTGAAATGAAATTGGATGATGGGCATGGTTCTAAGGTTTCTGGTGGTGTTGAGATGAGGAGAATTGAACCTGTGACTGTGCCTTTGGTTGATCTTCCAGAAATTTCTGAACCTTCAGTTCTCCTTTCAGATAGTATACGGAACGTTCTCTATGTTTCTCTTCCGCCTCTTATTCACGGAAGGAAATGGCTGTTGTTGTACAGCACTTGGAGGCATGGTATATCACTTTCCACTCTTTACCGGAGAAGCATGCTTTGGCCTGGATTGAGTTTGCTGGTTGTTGGAGATAAAAAAGGAGCAGTATTTGGCAGCTTAGTTGAAGCACCTCTCAGATCATCCAGCAAGAAAAAATACCAGGGAACAAACAAGACATTTGTTTTCACAAATATCTCTGGTCAGCCTGTTATATATCGTCCAACAGGAGTAAACCGCTTTTTCACACTGTGCAACACTGACTACATAGCAATTGGTGGAGGAGGTCATTTTGCGCTTTATTTGGATGGTGATCTATTGAATGGTTCAAGTTCAGTCTCGGAAACGTATGGGAATCCTTGCCTTGCAAATTCTCAAGACTTTGAAGTGAAGGAAGTAGAGTTATGGGGCTTTGTACATGCTTCAAAATATGAAGAAGTACTTGCAATGAGCAAAACAGAAGCACCCGGGGTCTGCCGATTCTGA 1125 0.44 MGKRQSLRNKATHLVSVLLNPISDSDTSNPKTSKQHPPAPTPTPPSGQVGGSETNDEEGNRGLVDGPDTSSFTAFLYSLLSSSDTGDNANSRVQSDDNKSAAPDHNPLPDSSSLKENGGRKSLISRSKQSIGKAIRRIGGFRHQDRRDNVEMKLDDGHGSKVSGGVEMRRIEPVTVPLVDLPEISEPSVLLSDSIRNVLYVSLPPLIHGRKWLLLYSTWRHGISLSTLYRRSMLWPGLSLLVVGDKKGAVFGSLVEAPLRSSSKKKYQGTNKTFVFTNISGQPVIYRPTGVNRFFTLCNTDYIAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLANSQDFEVKEVELWGFVHASKYEEVLAMSKTEAPGVCRF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00159 374 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 368 - -
Gma18g00159 374 MobiDBLite consensus disorder prediction 83 138 - -
Gma18g00159 374 MobiDBLite consensus disorder prediction 9 34 - -
Gma18g00159 374 MobiDBLite consensus disorder prediction 83 129 - -
Gma18g00159 374 MobiDBLite consensus disorder prediction 1 69 - -
Gma18g00159 374 Pfam TLD 214 351 IPR006571 -
Gma18g00159 374 SMART 109ultra 188 352 IPR006571 -
Gma18g00159 374 PANTHER TLD-DOMAIN NUCLEOLAR PROTEIN 1 368 - -
Gma18g00159 374 ProSiteProfiles TLDc domain profile. 189 352 IPR006571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00159 Gma-Chr18 1253392 1257348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00159 211 360 EF-hand Containing Proteins AT5G06260 30.625 4.82e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00159 - - gmx:100804124 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00159 18 1253392 1257348 Gma11g02417 11 39550066 39553813 GST