Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00144 ATGGCTAGTGGAAGAAGCTACGGAGACGCGAACCAGAAGGTAGATTACGTGTTCAAGGTGGTGCTAATTGGTGATTCCGCGGTGGGGAAGTCGCAGATACTTGCACGCTTCGCGAGAAACGAGTTCAGTTTGGACTCAAAGGCCACAATCGGCGTCGAGTTCCAAACGCGCACTTTGGTCATTCAGCACAAGAGCATCAAGGCTCAGATCTGGGACACTGCCGGCCAAGAACGATACAGAGCAGTTACAAGTGCATACTACAGGGGTGCTGTTGGGGCAATGTTGGTTTATGACATCACTAAACGTCAAAGCTTTGATCACATACCTCGTTGGTTAGAAGAACTGCGTAACCATGCGGATAAGAATATAGTCATCATTCTTATAGGAAACAAAAGTGATCTTGAGAACCAGCGTCAAAAATATTCAACATTATCAACAAGAAGAACCTAG 450 0.4622 MASGRSYGDANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIILIGNKSDLENQRQKYSTLSTRRT 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00144 149 ProSiteProfiles small GTPase Rab1 family profile. 13 149 - -
Gma18g00144 149 Pfam Ras family 19 139 IPR001806 GO:0003924|GO:0005525
Gma18g00144 149 SMART ras_sub_4 15 149 - -
Gma18g00144 149 PRINTS Transforming protein P21 ras signature 59 81 - -
Gma18g00144 149 PRINTS Transforming protein P21 ras signature 41 57 - -
Gma18g00144 149 PRINTS Transforming protein P21 ras signature 18 39 - -
Gma18g00144 149 PRINTS Transforming protein P21 ras signature 121 134 - -
Gma18g00144 149 Gene3D - 6 148 IPR027417 -
Gma18g00144 149 PANTHER - 1 139 - -
Gma18g00144 149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 141 IPR027417 -
Gma18g00144 149 TIGRFAM small_GTP: small GTP-binding protein domain 17 139 IPR005225 GO:0005525
Gma18g00144 149 ProSiteProfiles small GTPase Ras family profile. 11 149 IPR001806 GO:0003924|GO:0005525
Gma18g00144 149 PANTHER RAS-RELATED PROTEIN RABA4A 1 139 - -
Gma18g00144 149 SMART rab_sub_5 18 148 - -
Gma18g00144 149 SMART rho_sub_3 20 148 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00144 Gma-Chr18 1136820 1139597 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00144 K07904 - gmx:100791062 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00144 18 1136820 1139597 Gma11g02429 11 39651016 39653761 GST
Gma05g01747 05 39125921 39128924 Gma18g00144 18 1136820 1139597 PCT
Gma08g01234 08 10496153 10499690 Gma18g00144 18 1136820 1139597 PCT