Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00116 ATGGGTTGGTCGTTTCCATTGAGCCCTCTAGTGACAACAATAACAATAGTGCTCCTCTTGTGTGTCACACTCCAAACTAAGGTAGTGAAAGCTTTTCCACTATACACTCAAAATCGGTGGATAGTTGATGGGAATGCGACAAGGGTGAAGCTAGCATGTGTGAATTGGGTGTCCCATTTGGAATACATGGTGGCCGAGGGCTTAGGTGAGAGACCTTTGGATGGGATAGCCAAGGAAATCAAATCCATGGGCTTCAACTGTGTTAGACTCACATGGCCTATTTACTTGATCACCAATGACTCTCTTGCTACTCTTACTGTCAGACAATCTTTCAACAATCTTGGCTTGCCTCAAGCCATCTCTGCTCTCCAAGTCAACAACCCCTCTCTCATTGATCTTCCCCTCATCAAAGCTTACCAGGACGTGGTGAAAGGGCTGGGAGACAAGGGTTTAATGGTGATTTTGGACAACCACGTGTCAAAGCCGCAGTGGTGCTGCAGTAACGACGACGGAAATGGCTTCTTCGGGGACCAGTATTTCGATCCTGACCTCTGGATTAAGGGCCTTACCAAAATGGCCACCCTTTTCAAAGGAGTCACTAATGTCGTAGCCATGAGCTTGAGAAATGAGCTCCGAGGTCCCAGACAAAATGCCAATGATTGGTTCAAGTACATGCCAAAAGGAGCAGAGGCCGTGCATGGAGCAAATCCAGATGTTCTAGTCATTATGTCTGGCCTAAATTATGACCTAGACCTATCATTCCTCAGAAAGCAGCAAGTGAAACTGAGCTTCAGTGGAAAACTAGTATTCGAGTTGCACTGGTATAGCTTCAGTGACGGTGACTCATGGACAACAGAGAATCCAAACCAAGCGTGCGGGAAAGTGACAGGGAGAGTGATGAGAAGTGCAGGGTACTTGTTGGAGCAAGGATACCCATTGGTTTTGAGTGAGTTTGGGTGGGACTTGAGAGGCACAAACCAGAACGACAACAGCTACTTCAACTGCTTATTGCCCCTTGCAGCCCAGCTTGACTTTGATTGGGCCTATTGGACACTCGCTGGGAGTTATTACCTTAGAGAAGGAACTGTTGGATTAATCGAGGTTTATGGTATTCTCACTCAGAACACCACCCTCCCTACAACAACCTTCTTGTTGCAAAGGATCTCAGCTATTCAACTTCCTTATCGAGGGCCAGGGTTATCGGAAGTTGAAGCACACAAAGTGATTTTTCACCCATTGACAGGTCTTTGCATCTCGGGGAAGTTAGAGCCATTGAAGTTGGGACCCTGTTCTAATTCTGAGGGATGGGAATACACAGCCCAGAAGGTGCTATCAGTAAAGGGTAGAAATAGCACCTGTTTACAAGCAGAGGGAGAAGGGAAGGAAGCAAAACTTGGAAATGAATGCTCAGTATGGGAAATAATCTCTGATTCCAAGTTGCACCTCTCAAGTAAAATCAACAACGCTTCTGATGTGTGTCTGGATGTGGACTCCAACAACAACATTGTTACCAATGCATGCAAATGCCTGAGTGGTGATAAGACGTGTGACCCTGCAAGCCAATGGTTCAAACTTGTTGACAGCACCAGAAAGTCAACCTGA 1602 0.4632 MGWSFPLSPLVTTITIVLLLCVTLQTKVVKAFPLYTQNRWIVDGNATRVKLACVNWVSHLEYMVAEGLGERPLDGIAKEIKSMGFNCVRLTWPIYLITNDSLATLTVRQSFNNLGLPQAISALQVNNPSLIDLPLIKAYQDVVKGLGDKGLMVILDNHVSKPQWCCSNDDGNGFFGDQYFDPDLWIKGLTKMATLFKGVTNVVAMSLRNELRGPRQNANDWFKYMPKGAEAVHGANPDVLVIMSGLNYDLDLSFLRKQQVKLSFSGKLVFELHWYSFSDGDSWTTENPNQACGKVTGRVMRSAGYLLEQGYPLVLSEFGWDLRGTNQNDNSYFNCLLPLAAQLDFDWAYWTLAGSYYLREGTVGLIEVYGILTQNTTLPTTTFLLQRISAIQLPYRGPGLSEVEAHKVIFHPLTGLCISGKLEPLKLGPCSNSEGWEYTAQKVLSVKGRNSTCLQAEGEGKEAKLGNECSVWEIISDSKLHLSSKINNASDVCLDVDSNNNIVTNACKCLSGDKTCDPASQWFKLVDSTRKST 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00116 533 Gene3D Glycosidases 32 383 - -
Gma18g00116 533 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 13 532 - -
Gma18g00116 533 SUPERFAMILY (Trans)glycosidases 31 356 IPR017853 -
Gma18g00116 533 PANTHER CELLULASE (GLYCOSYL HYDROLASE FAMILY 5) PROTEIN 13 532 - -
Gma18g00116 533 SUPERFAMILY Ricin B-like lectins 404 525 IPR035992 -
Gma18g00116 533 Pfam Cellulase (glycosyl hydrolase family 5) 76 352 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00116 Gma-Chr18 929086 931582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00116 31 530 Glycoside Hydrolase AT1G13130 57.957 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00116 - - gmx:100805196 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00116 18 929086 931582 Gma18g00116 18 929086 931582 ECH