Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00055 ATGTCTCGGGTTGATAACAGAAATTCCTCAGCCACCAAGCGTGCTAGGACTGATGGTAGTCGTAGGGAAGATGATTGGACATGCCCCAGCTGTGGTAATGTTAATTTCTCTTTCAGGACAACTTGTAACATGCGTAATTGCACTCAACCAAGGCCGGCTGATCATAATTCTAAATCTGCTGCCAAGCCTCTACAAGCTCCACAGGGTTATTCATCCTCAGCTCCTTACTTAGGTTCTAATACCCCCTCTTCAATATATCTTGGTGTGCCACCATATGGGTCTTCTCTGTTCAATGGATCATCTGTTCCTCCCTATGATGTTCCATTTTCTGGAGGATCAGCATATCACTACAACTATGGTAGTCGCCTTTCTGCTGGGAGTCCTTATAGACCGTTGCATTTATCTGGACCAACACCCTACACTGGTGGACCAGTGATGGGAAATGGTGGGATATATGGAATGCCCCAACTGTTGGATCGATATGGCCTGGGCGTGCCTATTGGACCTGGGACAATGGGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTTTTCATTCAGAACTATCTGCAACATGAGAAAGTGCAACACACCCAAACCTGGATCCCAGGCCTCAAAGTCAGACAAAAATTCTAAGCAAAAGATGCCTGAGGGAAGCTGGAAGTGCGAAAAGTGTAACAACATAAACTATCCTTTCAGAACCAAGTGCAACAGACAGAATTGTGGTGCTGACAAGCCAGCCGAGTCTGAAAAATCTCCTTCACCAGCTGCAGATCAAAATGATCAGTGA 852 0.4542 MSRVDNRNSSATKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPLQAPQGYSSSAPYLGSNTPSSIYLGVPPYGSSLFNGSSVPPYDVPFSGGSAYHYNYGSRLSAGSPYRPLHLSGPTPYTGGPVMGNGGIYGMPQLLDRYGLGVPIGPGTMGARPGFFHDDKSQKKDATRDNDWTCPKCGNVNFSFRTICNMRKCNTPKPGSQASKSDKNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAADQNDQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00055 283 MobiDBLite consensus disorder prediction 1 25 - -
Gma18g00055 283 MobiDBLite consensus disorder prediction 262 283 - -
Gma18g00055 283 PANTHER ZINC FINGER PROTEIN 5 274 - -
Gma18g00055 283 MobiDBLite consensus disorder prediction 50 75 - -
Gma18g00055 283 MobiDBLite consensus disorder prediction 218 246 - -
Gma18g00055 283 Gene3D - 14 54 - -
Gma18g00055 283 Gene3D - 182 223 - -
Gma18g00055 283 Gene3D - 226 269 - -
Gma18g00055 283 SUPERFAMILY Ran binding protein zinc finger-like 16 54 IPR036443 -
Gma18g00055 283 Pfam Zn-finger in Ran binding protein and others 22 44 IPR001876 -
Gma18g00055 283 Pfam Zn-finger in Ran binding protein and others 192 221 IPR001876 -
Gma18g00055 283 Pfam Zn-finger in Ran binding protein and others 237 267 IPR001876 -
Gma18g00055 283 SUPERFAMILY Ran binding protein zinc finger-like 184 223 IPR036443 -
Gma18g00055 283 MobiDBLite consensus disorder prediction 9 25 - -
Gma18g00055 283 PANTHER OS08G0521400 PROTEIN 5 274 - -
Gma18g00055 283 SUPERFAMILY Ran binding protein zinc finger-like 231 268 IPR036443 -
Gma18g00055 283 SMART zf_4 24 50 IPR001876 -
Gma18g00055 283 SMART zf_4 193 219 IPR001876 -
Gma18g00055 283 SMART zf_4 239 265 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00055 Gma-Chr18 453028 456059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00055 181 270 EF-hand Containing Proteins AT1G55040 32.222 7.95e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00055 - - gmx:100798624 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00055 18 453028 456059 Gma18g00055 18 453028 456059 ECH
Gma18g00055 18 453028 456059 Gma11g02526 11 40380003 40383622 GST