Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00023 ATGAATATGGGTTCTTCTTCCCCTCCGGACACTAGCAAGAGCATAAAGCTAGAGCGATACAACAGCTACATCCGGAGACTCAACAGCACCAAGCTCCTCAACGCCTCCTCCAAACTCCTCTTCCGCGCCACTCTCTTGGTCGCACTCATCCTCGTCTTCCTCTTCACCTTCAACTACCCTCCCCTCTCCGCCACCGACTCCACCCACCGCCACCTCCACGCCCACTCCCACTACTTTCTCTCCTCCTCCTCCTTCGGCGCCTGGGAGAAGCAGGTCCGCCACTCCGCCTCCCCCCGCCGCCCCAACGGCCTCACCGTCCTGGTCACTGGGGCTGCGGGCTTCGTGGGCAGCCACTGCTCCCTGGCCCTGAAGAAGCGCGGCGACGGTGTCCTGGGGCTTGACAACTTCAACAACTACTACGACCCTTCCCTTAAACGCGCCCGGCAGGCAATGCTCTGGAAACACCAAGTGTTCATCGTGGAAGGTGACCTCAACGACACCCCCTTGCTCCAGAAGCTCTTCGACCTCGTCCCCTTCACCCACATCCTCCACCTGGCCGCACAGGCCGGCGTCCGCTACGCCATGCAGAACCCCCAATCCTACGTCACCGCCAACATCGCTGGCTTCGTCAACCTTCTCGAGGCTGCCAAATCCGCCAACCCCCAACCCGCCATTGTCTGGGCTTCGTCCAGCTCCGTCTACGGCCTCAACACCCAAAACCCTTTCTCCGAGCTCCACCGCACCGACCAGCCCGCCAGCCTCTACGCCGCCACCAAGAAGGCCGGCGAGGAAATCGCCCACACCTACAACCACATTTACGGCCTCTCCCTCACCGGACTCCGTTTCTTCACCGTCTACGGCCCCTGGGGAAGACCCGACATGGCTTACTTCTTCTTCACCAAAGACATCCTCCATGGGAAGACCATCGACGTCTACCAGACGCCGGAGGGGAAGCAGGTGGCGCGTGACTTTACCTACATCGACGACATCGTCAAGGGTTGCCTCGGCGCCCTCGACTCCGCCCAGAAGAGCACCGGGAGCGGCGGCAAGAAGCGGGGCCCTGCCCAGCTCAGAGTGTACAATCTAGGGAACACGTCACCGGTGCCGGTGGGGACCTTGGTGTCCATTCTAGAAGGTTTGCTGAAAACCAAGGCCAAGAAGCACGTCATTAAGATGCCATCTAACGGCGACGTTCCCTTCACTCACGCCAACGTCAGCTTGGCCTTCAGGGATTTCGCCTACAAACCCACCACCGATCTCTCCACCGGTCTCAGCAAGTTCGTCAAGTGGTACCTCGGTTATTACGGCCTCCAGCCAAGCCTGAAAAAGGATAATCACCTTCACAATATTGAATGA 1356 0.5966 MNMGSSSPPDTSKSIKLERYNSYIRRLNSTKLLNASSKLLFRATLLVALILVFLFTFNYPPLSATDSTHRHLHAHSHYFLSSSSFGAWEKQVRHSASPRRPNGLTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNNYYDPSLKRARQAMLWKHQVFIVEGDLNDTPLLQKLFDLVPFTHILHLAAQAGVRYAMQNPQSYVTANIAGFVNLLEAAKSANPQPAIVWASSSSVYGLNTQNPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILHGKTIDVYQTPEGKQVARDFTYIDDIVKGCLGALDSAQKSTGSGGKKRGPAQLRVYNLGNTSPVPVGTLVSILEGLLKTKAKKHVIKMPSNGDVPFTHANVSLAFRDFAYKPTTDLSTGLSKFVKWYLGYYGLQPSLKKDNHLHNIE 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00023 451 PRINTS Nucleotide sugar epimerase signature 132 148 - -
Gma18g00023 451 PRINTS Nucleotide sugar epimerase signature 357 372 - -
Gma18g00023 451 PRINTS Nucleotide sugar epimerase signature 322 337 - -
Gma18g00023 451 PRINTS Nucleotide sugar epimerase signature 397 414 - -
Gma18g00023 451 Gene3D - 283 431 - -
Gma18g00023 451 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 100 437 IPR036291 -
Gma18g00023 451 PANTHER BNAC03G74010D PROTEIN 8 448 - -
Gma18g00023 451 Gene3D - 107 418 - -
Gma18g00023 451 Pfam NAD dependent epimerase/dehydratase family 106 343 IPR001509 -
Gma18g00023 451 PANTHER EPIMERASE-RELATED 8 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00023 Gma-Chr18 179004 180726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00023 3 444 Miscellaneous Gene Families AT3G23820 78.146 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00023 K08679 - gmx:100811409 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00023 18 179004 180726 Gma11g02558 11 40629466 40631522 GST