Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02469 ATGAGGAAGTGGACGGTTGCTTCCGCTCTCCTTCTTCTCTCTCTCCTCTTTCTCTTTGCAGATCAAGGTCGAAAGTTTCAGGCGAATGCCGAGGGAGATTCCGACGAGCTTGTAGATCCTCCGAAGGTGGAGGACAAGATCGGTGCTGTGCCTCATGGCCTTTCCACCGATTCAGATGTCGTCAAGAGGGAGTCGGAGTCGATCTCGAAGAGATCTCTCCGGAGCAATGCGGAGAAGTTTGAGTTCCAAGCGGAAGTGTCACGGCTTATGGATATTATCATCAATTCTCTCTACAGTAACAAGGATATCTTCCTCAGAGAGTTGATTTCCAATGCTTCTGATGCTTTGGACAAGATTAGGTTCCTTTCCCTCACGGATAAGGACGTTTTGGGAGAAGGTGATAACACCAAGCTTGATATTCAGATTAAGTTGGACAAGGAAAAGAAAATTCTCTCAATTCGAGACAGAGGTATTGGTATGACGAAGGAGGATTTGATAAAGAATTTGGGGACAATAGCAAAATCTGGAACTTCTGCATTTGTTGAGAAGATGCAAACAAGTGGAGATCTCAATCTGATTGGGCAGTTTGGAGTCGGCTTCTACTCTGTTTATCTCGTGGCTGACTATGTCGAAGTCATTAGCAAGAATAATGATGATAAACAGTATGTATGGGAATCAAAAGCTGATGGAGCATTTGCAATTTCAGAAGATACATGGAATGAACCTCTAGGGCGTGGAACTGAGATTAGATTACACCTCAAGGAAGAGGCTGGGGAGTACTTGCAGGAGTCTAAACTGAAAGAATTGGTGAAGAGATACTCTGAATTTATTAACTTCCCTATCTATATTTGGGCAAGCAAAGAGGTTGATGTGGAGGTTCCCGCTGATGAAGATGATTCCAGTGATGAAGAGGATTCATCTGAAAGCAGCTCCAAGGAGGAAAGCGAAGATGAAGATGCTGATAAAAGTGAAGACGAAGAAAAAAAGCCCAAGACAAAGACGGTGAAGGAAACAACTTATGAATGGGAACTTTTAAATGATGTGAAAGCTATATGGCTGAGGAATCCAAAGGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGCGATGTCGAGTTCAAGGCAGTCCTGTTTGTACCACCTAAGGCACCTCAAGATTTATACGAGAGCTATTATAACGCAAACAAATCCAACCTGAAGTTGTATGTTAGACGTGTGTTCATTTCAGATGAATTTAATGAACTGTTGCCTAAGTACCTAAACTTTTTGCTGGGTCTTGTTGATTCTGACACATTGCCACTTAATGTATCGCGAGAAATGCTTCAGCAACATAGTAGTCTAAAGACAATCAAGAAGAAACTTATTAGGAAAGCCCTTGATATGATCCGTAGGATTGCTGATGAGGATCCTGATGAGTCCACTGACAAAGAAAAGAAAGaagatacgtcatctgacaataatgagaagaaaggtcaatattccaagttctggaatgagtttggtaaatccattaaacttggtatcatcgaggatgccaccaacagaAATCGTTTGGCAAAACTGCTCAGATTTGAGAGCACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAATGAAAGCTGGGCAGAAGGATATCTTTTACATAACTGGAACCAGCAAAGAACAACTGGAAAACTCTCCATTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGGTTATTTTCTTCACGGATCCAGTTGATGAATACTTGATGCAATACCTGATGGATTATGAAGACAAGAAGTTCCAAAATGTGTCCAAGGAGGGTTTGAAACTCGGGAAAGATTCAAAAGACAAGGAACTGAAGGAATCCTTCAAGGACCTTACCAAGTGGTGGAAAACTGCTCTTTCCAAAGACAATGTTGATGATGTGAAGATTTCCAACCGATTGGACAACACTCCTTGTGTAGTGGTAACATCAAAATTTGGTTGGAGTGCTAACATGGAGAGAATCATGCAGTCTCAAACTTTGTCTGATGCTAGCAAGCAAGCATACATGCGCGGCAAGAGGGTTCTTGAGGTCAATCCTAGGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGGATGAGGGTGTGAAACATACAGCACAGTTGATGTACCAGACCGCACTCTTCGAAAGTGGCTTCCTGCTTGATGATCCCAAGGATTTTGCTTCCCGTATTTATGATTCAGTTAAGACCAGCTTGGACATCAGTCCTGAAGCAACAGTTGAGGAGGAAGATGACACCGAAGTAGAGGCTGAAAGTGATTCAAAGCCTGAAGCTGATGCGGTTCATGATGGTGATGTTGATGATGCCAAGGACGAGTTGTAG 2445 0.4086 MRKWTVASALLLLSLLFLFADQGRKFQANAEGDSDELVDPPKVEDKIGAVPHGLSTDSDVVKRESESISKRSLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKDVLGEGDNTKLDIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKNNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLKEEAGEYLQESKLKELVKRYSEFINFPIYIWASKEVDVEVPADEDDSSDEEDSSESSSKEESEDEDADKSEDEEKKPKTKTVKETTYEWELLNDVKAIWLRNPKEVTEEEYTKFYHSLAKDFSDEKPLAWSHFTAEGDVEFKAVLFVPPKAPQDLYESYYNANKSNLKLYVRRVFISDEFNELLPKYLNFLLGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRRIADEDPDESTDKEKKEDTSSDNNEKKGQYSKFWNEFGKSIKLGIIEDATNRNRLAKLLRFESTKSEGKLTSLDQYISRMKAGQKDIFYITGTSKEQLENSPFLERLKKKNFEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKDKELKESFKDLTKWWKTALSKDNVDDVKISNRLDNTPCVVVTSKFGWSANMERIMQSQTLSDASKQAYMRGKRVLEVNPRHPIIKELRERVVKNPEDEGVKHTAQLMYQTALFESGFLLDDPKDFASRIYDSVKTSLDISPEATVEEEDDTEVEAESDSKPEADAVHDGDVDDAKDEL 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02469 814 PRINTS 90kDa heat shock protein signature 78 98 IPR020575 -
Gma17g02469 814 PRINTS 90kDa heat shock protein signature 99 121 IPR020575 -
Gma17g02469 814 PRINTS 90kDa heat shock protein signature 150 167 IPR020575 -
Gma17g02469 814 PRINTS 90kDa heat shock protein signature 168 185 IPR020575 -
Gma17g02469 814 PRINTS 90kDa heat shock protein signature 193 215 IPR020575 -
Gma17g02469 814 PRINTS 90kDa heat shock protein signature 245 262 IPR020575 -
Gma17g02469 814 PRINTS 90kDa heat shock protein signature 263 281 IPR020575 -
Gma17g02469 814 MobiDBLite consensus disorder prediction 778 793 - -
Gma17g02469 814 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 78 287 IPR036890 -
Gma17g02469 814 MobiDBLite consensus disorder prediction 487 511 - -
Gma17g02469 814 Pfam Hsp90 protein 259 797 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma17g02469 814 MobiDBLite consensus disorder prediction 773 814 - -
Gma17g02469 814 MobiDBLite consensus disorder prediction 487 509 - -
Gma17g02469 814 MobiDBLite consensus disorder prediction 293 323 - -
Gma17g02469 814 ProSitePatterns Heat shock hsp90 proteins family signature. 98 107 IPR019805 GO:0005524|GO:0006457|GO:0051082
Gma17g02469 814 Gene3D - 65 300 IPR036890 -
Gma17g02469 814 MobiDBLite consensus disorder prediction 794 814 - -
Gma17g02469 814 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 101 256 IPR003594 -
Gma17g02469 814 Gene3D - 540 627 - -
Gma17g02469 814 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 19 799 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma17g02469 814 SUPERFAMILY Ribosomal protein S5 domain 2-like 348 627 IPR020568 -
Gma17g02469 814 PANTHER BNAA08G14800D PROTEIN 19 799 - -
Gma17g02469 814 PIRSF HSP90_HTPG 54 813 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma17g02469 814 MobiDBLite consensus disorder prediction 293 334 - -
Gma17g02469 814 CDD HATPase_Hsp90-like 87 277 - -
Gma17g02469 814 Gene3D - 347 539 - -
Gma17g02469 814 SUPERFAMILY HSP90 C-terminal domain 646 768 IPR037196 -
Gma17g02469 814 SMART HKATPase_4 100 257 IPR003594 -
Gma17g02469 814 Hamap Chaperone protein HtpG [htpG]. 75 770 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma17g02469 814 Gene3D - 634 780 IPR037196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02469 Gma-Chr17 42723015 42728019 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02469 K09487 - gmx:100819942 1487.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02469 17 42723015 42728019 Gma17g02469 17 42723015 42728019 ECH