Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02422 atggtgaagcattcgcaagcgtggttgGCAATGCGGAGCAAGACTTGTGCGCTAACACTCCTGGCACTCTTGTCCCTCTCCACCCTCACCCTCCTCTTCCTCCGAACCACTTCCGATTCCTGCACCCAACCTCAGGTTCGGAATTTGGATGCGCTTCAGCCTCGGACTGATTCCAAGTTACCGAACCCTCTGGAATTCATGAAGTCGAAGCTCGTTCTCATGGTCTCGCACGAACTCTCCCTCTCCGGAGGACCTCTCTTGCTCATGGAACTAGCGTTTCTGCTACGCTCCGCCGGATCCGACGTCGTTTGGATCACCAATCAGAAACCTCCTAAACCCGACGATGTCATCTACACTTTAGAAAACAAAATGCTCGACAGAGGAGTGCAGGTGGTGGATGCGAGAGGTGAAAAGGCTGTGGATACAGCTCGTAATGCAGACTTGGTGATTTTGAATACTGCTGTGGCTGGGAAGTGGCTTGATGCTGTTCTCAAAGAAAAAGTTTTGGAGGTTCTTCCAAAGGTTTTGTGGTGGATTCATGAAATGCGAGGGCATTATTTCAAAGTGGAGTATGTTAAGCACCTCCCTTTTGTTGCAGGTGCCATGATCGATTCGCATACGACTGCTGAATACTGGAAGAATAGGACTAGGGAGCGTTTAGGGATTAAAATGCCTGAAACCTATGTTGTACATCTTGGAAATAGCAAGGAGCTTATGGAGGTTGCGGAAGATAGCGTGGCCAAGAGGGTTCTTCGAGAGCATGTTCGGCAATCTCTTGGAGTGAGGAATGATGATCTACTTTTTGCCATCATAAATAGTGTTTCACGTGGTAAAGGGCAGGATCTATTTCTTCGGTCCTTTTATGAAAGTTTGATGCTCATCCAGGAGAAGAAACTGCAAGTTCCATCTTTGCATGCTATAGTTGTAGGGAGTGACATGAATGCTCAGACAAAGTTTGAAACGGAATTGCGTCAGTTTGTCATGGAGAAAAAAATCCAGGACCGTGTTCACTTTGTTAACAAAACCCTGGCAGTGGCTCCTTATCTGGCTTCTATTGATGTTCTTGTTCAGAATTCTCAGGCTAGGGGAGAATGTTTTGGGAGGATAACCATTGAAGCAATGGCATTTCGCCTGCCTGTACTTGGAACTGCAGCTGGGGGCACAGTGGAGATTGTGGTGAATAGGACAACTGGTTTACTGCACCCCGTTGGAAAAGAAGGTGTGACACCTCTTGCAAAAAACATTGTGAATTTGGCAACTCATGTTGAGAGGAGGCTAACTATGGGAAAGAAAGGATATGAGAGAGTGAAGGAGAGGTTTCTGGAGCCACACATGGCACAGAGAATCGCATTGGTTCTGAAGGAAGTGTTACGGAAGGGTAGCCACAATTAA 1392 0.4605 MVKHSQAWLAMRSKTCALTLLALLSLSTLTLLFLRTTSDSCTQPQVRNLDALQPRTDSKLPNPLEFMKSKLVLMVSHELSLSGGPLLLMELAFLLRSAGSDVVWITNQKPPKPDDVIYTLENKMLDRGVQVVDARGEKAVDTARNADLVILNTAVAGKWLDAVLKEKVLEVLPKVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNSKELMEVAEDSVAKRVLREHVRQSLGVRNDDLLFAIINSVSRGKGQDLFLRSFYESLMLIQEKKLQVPSLHAIVVGSDMNAQTKFETELRQFVMEKKIQDRVHFVNKTLAVAPYLASIDVLVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTVEIVVNRTTGLLHPVGKEGVTPLAKNIVNLATHVERRLTMGKKGYERVKERFLEPHMAQRIALVLKEVLRKGSHN 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02422 463 Pfam Glycosyl transferases group 1 254 434 IPR001296 GO:0016757
Gma17g02422 463 Gene3D Glycogen Phosphorylase B; 241 440 - -
Gma17g02422 463 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 67 458 - -
Gma17g02422 463 PANTHER GLYCOSYLTRANSFERASE 1 460 - -
Gma17g02422 463 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 1 460 - -
Gma17g02422 463 Pfam Glycosyl-transferase family 4 68 247 IPR041693 -
Gma17g02422 463 CDD GT4_PimA-like 96 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02422 Gma-Chr17 42193849 42198206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02422 8 458 Glycosyltransferase AT1G19710 73.362 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02422 - - aprc:113847885 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02422 17 42193849 42198206 Gma17g02422 17 42193849 42198206 ECH