Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02395 ATGCAAAATCTTAACCGTTTCGTCTCGTTTTCTCTCCCCAACACTCGAATCTTCTCCTTCCCCGCACGGTTACACTCCGCGTCCGCAGGAGCTAATCAGTGGCTTGCTCGATTTTCAATGGATGGGATCCATGCAATTGGTGCACGTCACCAAAACTCAGTTGATTTTCCTGACAGTGATAGTGCCAAACAGCTGCGTATATTGTCATCATCTCCTGATTTAGGACCTACAACTGATATAGGCAAGCAGATTTTCTGTAACCGGTCACTGAATATGAAAAACATTGTTGCTGTGGGATTTGACATGGATTATACTTTGGCACAATACATTCCTGAAACTTTTGAATCTCTTGCTTATCAACACACAGTTGAAAAGCTGGTTTATGATTTGGATTACCCTAGAGAGTTACTGAGTTGGTCATTTGACTCGAATTACATGGTTAGGGGCTTGGTTCTTGACAAAAAGAGAGGCAACATCTTGAAGATGGATCGCCACAAATATGTGAAAGTGGCCTATCATGGATTTAAAGAGTTGTCAAAAGAAGATAAAGTTGGAACATATGAAAATACTTTAGTACATGATTCTTTCGATGGGCCAGACTATGCTCTCATTGATACACTTTTTTCACTTGCGGAAGCCTACTTATTTGCTCAGCTTGTTGATTTTAAGGACGGAAATCCTGGAAAGATTCAAGAGCATGTAGATTATGCTCGTCTGTACAAAGATGTTCGAAATGCAGTAGATTTGTGCCACCGAGATGGAACATTAAAGCAAAAGGTTGCTATAGATCCCAAAAGGTATATCAATGAAGACACCTCCATAGTTCCCATGCTTAAAATGCTTAGAGATTCTGGACGAGCTACATTTTTGGTGACAAACAGTTTATGGGACTATTCAAATGTCGTCATGAATTTCCTCTGTGGATCCAGTGAGGCAAATGAGAGTACCCAGTTTGACTGGCTTAAATACTTTGATGTCGTCATCACTGGCAGTGCAAAGCCAAGCTTTTTTCTCGAGGGAAATCATGCCAACCTGTTTGAGGTCGTCCCTGAGAGTGGAATGCTACTTAATACAGATAATGGCTCTCCAATGGCTCAGGTGGGTAATACCTCTGCAAGAGTACTAAAGGAAGAGAAGGGTCATGCTCGAAAAGTTTTCCAGGGAGGCAGCGTTGGTCACCTACATAATCTACTCTCAATAGAATCAAGTTCACAGGTTCTATATGTTGGGGATCACATTTACGGAGATATTCTACGCAGCAAAAAGGTTCTTGGTTGGAGAACAATGTTGGTAATCCCAGAGCTTGAGAAGGAGGTTAAACTACTTTGGGAATTGAGAGATGCTCGTAAGgaacttcaacatctgaggagtgagcgagaccgcattgaggatgaaatgcattatctgaatgagtctctcagattaaagaatccagatgaggataccaaacaaaagtttaactcgaaacttgataaattgaagCTTGAAAGAGAGAGAGTACGATTAAGTCATCAAGAAGCTCAAAGAAAATTACACCAAAAGTTTCACGAGCCATGGGGCCAGCTGATGAAGACTGGTTATCAGAACTCTCGCTTTGCACATCAGGTTGAGCGATTTGCGTGCCTTTATACTAGCCAAGTATCTAACTTGGCGTTGTTCTCTTCAGACAAGTACTACAGACCCAGTGAAGATTTTATGCAGCATGAATttagcattttcgaaagctga 1728 0.3802 MQNLNRFVSFSLPNTRIFSFPARLHSASAGANQWLARFSMDGIHAIGARHQNSVDFPDSDSAKQLRILSSSPDLGPTTDIGKQIFCNRSLNMKNIVAVGFDMDYTLAQYIPETFESLAYQHTVEKLVYDLDYPRELLSWSFDSNYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFKELSKEDKVGTYENTLVHDSFDGPDYALIDTLFSLAEAYLFAQLVDFKDGNPGKIQEHVDYARLYKDVRNAVDLCHRDGTLKQKVAIDPKRYINEDTSIVPMLKMLRDSGRATFLVTNSLWDYSNVVMNFLCGSSEANESTQFDWLKYFDVVITGSAKPSFFLEGNHANLFEVVPESGMLLNTDNGSPMAQVGNTSARVLKEEKGHARKVFQGGSVGHLHNLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVIPELEKEVKLLWELRDARKELQHLRSERDRIEDEMHYLNESLRLKNPDEDTKQKFNSKLDKLKLERERVRLSHQEAQRKLHQKFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLALFSSDKYYRPSEDFMQHEFSIFES 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02395 575 Coils Coil 483 510 - -
Gma17g02395 575 CDD HAD_cN-II 85 545 - -
Gma17g02395 575 Pfam 5' nucleotidase family 84 570 IPR008380 -
Gma17g02395 575 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 84 452 IPR008380 -
Gma17g02395 575 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 2 575 - -
Gma17g02395 575 SUPERFAMILY HAD-like 82 571 IPR036412 -
Gma17g02395 575 PIRSF NT5C2 65 575 IPR016695 -
Gma17g02395 575 Gene3D - 80 128 IPR023214 -
Gma17g02395 575 Gene3D - 244 462 IPR023214 -
Gma17g02395 575 Coils Coil 438 472 - -
Gma17g02395 575 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 2 575 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02395 Gma-Chr17 41974966 41981870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02395 - - gmx:100814787 1155.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02395 17 41974966 41981870 Gma17g02395 17 41974966 41981870 ECH