Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02372 ATGGCTCTAATCCCAAACTCAAAAACCTCTGCACTCTTCCACCTGCTCCTCTTCTTATTAGGCAATGTAGCATATGCCACAGTGTTTACCCTGGAGAATCATTGCAGTTACACAGTTTGGCCCGGCACACTTTCCGGCAACGGCGCTGCCCTTCTCGGCGAAGGCGGTTTCGCCCTGGCACCCGGTTCGGCGGTCCAGCTCACCGCGCCGGCTGGCTGGTCCGGCCGCTTCTGGGCCCGGACCGGGTGCAGCTTCGACGCCTCCGGAAGCGGAAAATGTGTCACCGGAGACTGCGGCAGCGGACTGAAGTGCAGCGGCGGAGGCGTTCCGCCGGCGACTCTGGCGGAATTCACCCTCGGAAGCGCCAGCAACGGCAACAAGGACTTCTACGACGTGAGCCTGGTGGACGGTTACAATGTGGGCATGGGTGTGCGGGCTACCGGCGGAACCGGTGACTGCCAGTACGCGGGGTGCGTGGCGGACGTGAACGGTGTTTGCCCGGCGGAGCTGCAGGTGAGAGACGGCAGCGGCGCGGTGGTGGCGTGCAAGAGTGCGTGCTTGGCGTTGAATACGGCGGAGTATTGCTGCACCGGCGACCACAACACGCCGCAGACATGTCCGCCGACGCATTATTCGGAGATATTCAAGAATGCGTGTCCCACAGCGTACAGTTACGCATACGATGATGCGTCGAGCACTTGCACGTGTTCTGGATCAGATTACCGTATCACATTTTGCTCCACGTGA 747 0.6078 MALIPNSKTSALFHLLLFLLGNVAYATVFTLENHCSYTVWPGTLSGNGAALLGEGGFALAPGSAVQLTAPAGWSGRFWARTGCSFDASGSGKCVTGDCGSGLKCSGGGVPPATLAEFTLGSASNGNKDFYDVSLVDGYNVGMGVRATGGTGDCQYAGCVADVNGVCPAELQVRDGSGAVVACKSACLALNTAEYCCTGDHNTPQTCPPTHYSEIFKNACPTAYSYAYDDASSTCTCSGSDYRITFCST 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02372 248 SUPERFAMILY Osmotin, thaumatin-like protein 28 246 IPR037176 -
Gma17g02372 248 Pfam Thaumatin family 33 246 IPR001938 -
Gma17g02372 248 SMART tha2 29 247 IPR001938 -
Gma17g02372 248 Gene3D Thaumatin 27 246 IPR037176 -
Gma17g02372 248 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Gma17g02372 248 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Gma17g02372 248 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Gma17g02372 248 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Gma17g02372 248 ProSiteProfiles Thaumatin family profile. 26 248 IPR001938 -
Gma17g02372 248 PANTHER OS03G0233200 PROTEIN 23 247 IPR001938 -
Gma17g02372 248 PIRSF PR5 2 248 IPR001938 -
Gma17g02372 248 CDD TLP-PA 28 246 - -
Gma17g02372 248 PANTHER PATHOGENESIS-RELATED PROTEIN 5 23 247 - -
Gma17g02372 248 ProSitePatterns Thaumatin family signature. 89 104 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02372 Gma-Chr17 41776931 41778467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02372 10 246 Receptor kinase-like Gene Family AT5G38280 45.082 1.09e-60 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02372 - - gmx:100807814 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02372 17 41776931 41778467 Gma17g02372 17 41776931 41778467 ECH
Gma17g02372 17 41776931 41778467 Gma14g00665 14 6535073 6536800 GST