Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02339 ATGGAAGCAACGAAAGGATTTGTATCTCCAACTTCATGCAAATGTGATGATGGACACCTAGTTACCGTGCTTAGTATTGATGGTGGCGGCATTCGGGGAATCATTCCAGGAATTATACTTGGTTTCCTCGAATCAGAACTTCAGAAGCTTGATGGTGATCATGTAAGATTGGCAGATTACTTTGATGTGATTGCGGGAACAAGTACTGGAGGATTAGTGACTGCAATGCTCACTGCTCCAGATGAAAATAACCGACCCTTGTATGCAGCCAAGGATATTAAGGATTTCTACCTTGATCATACCCCTAAAATCTTCCCACAAAATAACAATTTATTCTCACCTATCCTGAAGTTGGGCAGAACCCTGTTTGGACCACAGTACAACGGCAAGTACTTACACAAGCTTATCAGGGAGAAACTGGGAGACACAAAATTGCACCAAACATTGACCAATGTCGTCATCCCAGCATTTGACATCAAGCACCTTCAACCCGCCATCTTTTCCAGCTTCCAGCTGAAAAAGAGACCCGATTTGAATGCATCTTTGTCGGATATATGCATTTCAACTTCAGCTGCTCCAACATATCTTCCAGCTCATTCCTTTGAAACCAAGACTCACCACGGTGTCAGCAAATTCGACCTTATAGACGGTGGCGTCGCTGCAAATAATCCGGCTTTGGTAGCCATGGCGGAAGTGACGAATCGAATTAGCCATGAAGGGCAATGTAATAGCTTAAATGTGAAACCAATGCAATACGATCGATTTTTGGTGATATCGTTGGGAACAGGTTCTCAGCAAAAGGAAATGAAATACAGTGCAGATGAGGCAGCTCAATGGGGCATCTTTAGTTGGGTAACTACAACCAATGGTGGCACCCCTTTAATTGATGCCTTTAGCCATGCAAGTTCAGACATGGTTGACTTTCACATCACCTCCCTTTTCCAAGCACTCAATTCTGAACATAACTATCTCCGTATCCAGGACGATTCATTAAATGGGGACATGTCTTCGGTAGACTTGGCCACGGAGAAGAATTTGAATGATCTCGTGAAAGTTGGGGAGTCATTGTTAAAGAAACCAGTTTCAAAGATTAACTTGCAGACTGGCGTTCACGAACCTGTTAACTCTCATGAAacaaatggagaagccttgaagagGTTTGCGGAACGACTATCCAAACAGAGGAGATTTCGTAAATCTCAAATGTCTGCCAATGGGAATCTTTAG 1227 0.4238 MEATKGFVSPTSCKCDDGHLVTVLSIDGGGIRGIIPGIILGFLESELQKLDGDHVRLADYFDVIAGTSTGGLVTAMLTAPDENNRPLYAAKDIKDFYLDHTPKIFPQNNNLFSPILKLGRTLFGPQYNGKYLHKLIREKLGDTKLHQTLTNVVIPAFDIKHLQPAIFSSFQLKKRPDLNASLSDICISTSAAPTYLPAHSFETKTHHGVSKFDLIDGGVAANNPALVAMAEVTNRISHEGQCNSLNVKPMQYDRFLVISLGTGSQQKEMKYSADEAAQWGIFSWVTTTNGGTPLIDAFSHASSDMVDFHITSLFQALNSEHNYLRIQDDSLNGDMSSVDLATEKNLNDLVKVGESLLKKPVSKINLQTGVHEPVNSHETNGEALKRFAERLSKQRRFRKSQMSANGNL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02339 408 PANTHER XYLOSE ISOMERASE 15 403 - -
Gma17g02339 408 SUPERFAMILY FabD/lysophospholipase-like 21 377 IPR016035 -
Gma17g02339 408 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 24 229 IPR002641 GO:0006629
Gma17g02339 408 Gene3D Cytosolic phospholipase A2 catalytic domain 12 404 - -
Gma17g02339 408 PANTHER PATATIN 15 403 - -
Gma17g02339 408 Pfam Patatin-like phospholipase 24 229 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02339 Gma-Chr17 41375226 41379001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02339 18 398 Miscellaneous Gene Families AT2G26560 62.924 8.94e-171 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02339 - - gmx:100799835 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02339 17 41375226 41379001 Gma17g02339 17 41375226 41379001 ECH