Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02309 ATGGCTTTTCCTCAGCACCACTTCCAACAGCACTACCAAACCCAACAGCAACAACAGCCACAAAACAAATCCTTCAGAAATCTGCAAACAATCGATGGTCAGATGTCACAGCAGGTGGCGTTTTACAACCCTACTGATTTGCAAGATCAATCCCAACATCCACCCTACATTCCTCCATTTCATGTTGTTGGGTTTGCTCCGGGTCCTGTTCCTCCTGCTGATGGCAGTGATGGTGGAGTTGATTTGCAATTGCAATGGAATTATGGTTTGGAGCCAGAGAGGAAGAGACTAAAAGAACAGGATTTTTTGGAGAACAATTCTCAGATATCTTCTGTTGATTTCCTTCAACCACGATCAGTGTCGACTGGGTTGGGCTTGTCACTAGACAATACTCGCCTGACATCCACTGGAGACTCAGCTTTGTTGTCACTCATCGGTGATGACATCGAGCGTGAGTTGCAGCAGCAGGACGCAGAGATAGATAGATTTCTCAAAGTGCAGGGTGGACGTTTGCGGCAAGCAGTCTTGGAGAAGGTTCAGGCAACACAGCTTCAGAGTGTCTCACTAATTGAAGACAAAATCCTTCAGAAACTTCGCGAGAAAGAAGCTATGGTAGAAAGCATCAACAAGAGGAACATTGAACTCGAAGATCAAATGGAGCAGTTGACTGTGGAAGCTGGTTCGTGGCAACAGCGAGCAAGATATAATGAAAATATGATTGCTGCTCTCAAGTTCAACCTTCAGCAAGCGTATGTCCAAAGCAGAGATAGTAAAGAAGGATGTGGTGACAGTGAGGTCGACGATACAGCTTCTTGCTGCAATGGCCGTTCCCTCGATTTTCATCTGCTTTCAAGGGAGAACACCGACATGAAAGAGATGATGACATGCAAGGCTTGCAGAGTCAATGAAGTGACCATGGTTTTGTTACCTTGTAAGCATCTTTGCCTCTGTAAAGATTGTGAAAGTAAGCTTAGTTTCTGTCCTCTATGTCAATCCTCCAAATTTATCGGCATGGAGGTCTACATGTAA 1029 0.45 MAFPQHHFQQHYQTQQQQQPQNKSFRNLQTIDGQMSQQVAFYNPTDLQDQSQHPPYIPPFHVVGFAPGPVPPADGSDGGVDLQLQWNYGLEPERKRLKEQDFLENNSQISSVDFLQPRSVSTGLGLSLDNTRLTSTGDSALLSLIGDDIERELQQQDAEIDRFLKVQGGRLRQAVLEKVQATQLQSVSLIEDKILQKLREKEAMVESINKRNIELEDQMEQLTVEAGSWQQRARYNENMIAALKFNLQQAYVQSRDSKEGCGDSEVDDTASCCNGRSLDFHLLSRENTDMKEMMTCKACRVNEVTMVLLPCKHLCLCKDCESKLSFCPLCQSSKFIGMEVYM 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02309 342 MobiDBLite consensus disorder prediction 1 24 - -
Gma17g02309 342 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 342 IPR017066 -
Gma17g02309 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 282 342 IPR013083 -
Gma17g02309 342 Coils Coil 198 232 - -
Gma17g02309 342 PANTHER F2G19.2 1 342 - -
Gma17g02309 342 Pfam Zinc finger, C3HC4 type (RING finger) 294 332 - -
Gma17g02309 342 ProSiteProfiles Zinc finger RING-type profile. 296 331 IPR001841 -
Gma17g02309 342 MobiDBLite consensus disorder prediction 7 24 - -
Gma17g02309 342 PIRSF SBP1_RNase_bind 1 342 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02309 Gma-Chr17 41068251 41071408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02309 296 332 Miscellaneous Gene Families AT4G39050 45.946 3.59e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02309 K19042 - gmx:100811918 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02309 17 41068251 41071408 Gma17g02309 17 41068251 41071408 ECH
Gma17g02309 17 41068251 41071408 Gma14g00732 14 7382863 7386108 GST