Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02278 ATGTCCGACACGGAAACCACGCCCGAACAACCCTCCACTCCGCCGCAAACGGAGGCTCCGCCGCAGCCCGACCCCTCCGCCGCCGTCTCCTTCAGCATATGGCCCCCCACTCAGCGCACCCGCGACGCCGTCGTCAAACGCTTGATCGAGACCCTCTCCGCCCCCTCCGTCCTCTCCAAGCGCTACGGCACTCTCTCCTCCGACGAAGCCTCCGCCGCCGCCCGACAGATCGAGGACGAGGCCTTCTGCGCCGCCACCGCAGCCTCCGCTTCGGCCGCCGCCGACGGCATTGAGACCCTCCAGGTCTACTCCAAGGAGATCAGCAAGCGGATGCTCGACACCGTCAAGGCCAGAGCTCCGCCGAGTCCCGCCGCCGTAGAGGGCGTCGCCGCCGCCGTCTCCGACTAA 408 0.6912 MSDTETTPEQPSTPPQTEAPPQPDPSAAVSFSIWPPTQRTRDAVVKRLIETLSAPSVLSKRYGTLSSDEASAAARQIEDEAFCAATAASASAAADGIETLQVYSKEISKRMLDTVKARAPPSPAAVEGVAAAVSD 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02278 135 MobiDBLite consensus disorder prediction 1 35 - -
Gma17g02278 135 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 6 127 IPR044692 GO:0000278|GO:0048527
Gma17g02278 135 Pfam WPP domain 30 120 IPR025265 -
Gma17g02278 135 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 6 127 - -
Gma17g02278 135 Gene3D WPP domain 30 124 IPR038214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02278 Gma-Chr17 40687964 40688798 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02278 - - gmx:547538 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02278 17 40687964 40688798 Gma17g02278 17 40687964 40688798 ECH
Gma17g02278 17 40687964 40688798 Gma14g00759 14 7794261 7795264 GST
Gma17g02278 17 40687964 40688798 Gma04g00406 04 3524388 3525231 PCT
Gma17g02278 17 40687964 40688798 Gma06g00392 06 3390060 3390883 PCT
Gma04g00406 04 3524388 3525231 Gma17g02278 17 40687964 40688798 PCT
Gma06g00392 06 3390060 3390883 Gma17g02278 17 40687964 40688798 PCT