Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02200 ATGTCTCCTGCTTTCAGGGGTTATTATTTTGTCCCGAGGCATATTACCTTCTGCTCCACAATTTCTGCATTTATCATATTAGTCCACCTGGGCATGAGGTCTGTAGCTTTGTATCTTGAAGCTTTGGGAGCTGCTGCAATCGATCAAGATCACCCAATTCTTTCTGTAGATGATTTAGCTGATCAAATAGCCGAGGTTCTCAACTTTTTTGGTCTTAGTGCAGTCATGTGTATGGGAGTAACTGCTGGGGCTTACATTCTTACCTTATTTGCTATGAAGTATAGACAACGTGTTCTTGGTTTGATACTTGTTTCTCCTCTATGTAAAGAACCGTCTTGGACTGAATGGTTGTACAACAAGGTCATGTCAAATTTACTATACTTTTATGGCATGTGTGGGGTGGTTAAGGAAATATTGCTGAAGCGGTACTTTAGCAAGGAAATTCGAGGTGGCACTCAATTGCCGGAGTCAGATATAGTTAAATCTTGTCGAAGGTTGTTGGATGAGAGGCAGAGTTTGAATGTGTGGCGATTCCTGGAAGCTATTAACGAGAGACCTGACATAAGTGAAGGGTTGAGAAAACTACATTGCCGTTCGCTTATTTTTGTTGGGGATATGTCACCATTTCACTCGGAGGCTGTTCACATGACTTCAAAGTTAGACAGACGATTCAGTGCCTTAGTTGAGGTTCAAGCATGTGGATCAATGGTAACAGAGGAGCAGCCTCATGCCATGTTAATACCAATGGAGTACTTTCTCATGGGATATGGCTTGTACAAGCCATCCAAGTTGAGTGTCAGCCCAAGAAGTCCCTTGAGCCCATCATGCATTTCGCCTGAGCTTTATTCACCAGAGAGCATGGGTTTGAAATTGAAACCCATAAAGACACGAATTTCTCTGGAAATCTAG 909 0.4246 MSPAFRGYYFVPRHITFCSTISAFIILVHLGMRSVALYLEALGAAAIDQDHPILSVDDLADQIAEVLNFFGLSAVMCMGVTAGAYILTLFAMKYRQRVLGLILVSPLCKEPSWTEWLYNKVMSNLLYFYGMCGVVKEILLKRYFSKEIRGGTQLPESDIVKSCRRLLDERQSLNVWRFLEAINERPDISEGLRKLHCRSLIFVGDMSPFHSEAVHMTSKLDRRFSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYKPSKLSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISLEI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02200 302 PANTHER PROTEIN NDL2 5 302 - -
Gma17g02200 302 SUPERFAMILY alpha/beta-Hydrolases 38 253 IPR029058 -
Gma17g02200 302 Pfam Ndr family 42 259 IPR004142 -
Gma17g02200 302 PANTHER N-MYC DOWNSTREAM REGULATED 5 302 IPR004142 -
Gma17g02200 302 Gene3D alpha/beta hydrolase 31 255 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02200 Gma-Chr17 39712860 39718135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02200 - - gmx:100781823 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02200 17 39712860 39718135 Gma17g02200 17 39712860 39718135 ECH
Gma17g02200 17 39712860 39718135 Gma14g00850 14 9127281 9131757 GST
Gma17g02200 17 39712860 39718135 Gma04g00468 04 4190858 4195011 PCT
Gma17g02200 17 39712860 39718135 Gma06g00462 06 3953394 3957865 PCT
Gma04g00468 04 4190858 4195011 Gma17g02200 17 39712860 39718135 PCT
Gma06g00462 06 3953394 3957865 Gma17g02200 17 39712860 39718135 PCT