Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02190 ATGTGCATGGTAGCGACTTCTCGTGAAAAGCTTATGAGTCTTGTGAACGTCACTAAGTTGCCCAACAACTCTTGTCAAAGCTTGAATCGTTGTGCCAACTCCACCATGAACTTTCCCGAAGACCCCATCCTCCTTACCAAAATTGAGTTTCTATCAGCTACAAGGGTTTTTCTTGTTCTGTGCCACACGATGAAGGAAGAAAACCCATCAGAGAACAGGTCCAAAGCTTCAAAATTTTCAGACCAAAACCAAGCCCCAAAGCCTCAAAACACCAAAGGAGCCAACCTCAACAACAACAACAAAACAAGGTTGTGGGGTGCTCACATTGTGAAAGGCTTCTCCGCTGACAAAAAAACCAAGTCATTTGCCAGCAAAAAACTAACATCTTCAACAACAACAACAGCAATATCCGAGAATGTTGTTACAAACCAGAACAACAGCAATAAACCTTTTGTGCCTTCTTCTCATTCTCGAGTGAAAAGGTCCCTCATAGGTGACTTATCATGTTCAATAAACCCTGCTCAGGTTCATCCACACGCTTTCCCAACTCATAGAAGACAATCTTCAACCGATTTGTTCACTGAGTTGGATCACATGAGAGGATTGCTGCAAGAGTCAAAGGAGAGGGAAAGCAAGTTGCATGCTGAACTTTCCGAGTGCAGGAAGAAAATGACTGAGGTGGATGAGGTTGTGAAGAGGGTTGGTTTGTTGGAGCAAGAGAAGGCCACTCTCACCGAGCAATTGGGTGCTGCATTGAGTTGTGAGGAAGTGAAAGGGGAAGAAGAGCAGCACAAGGAGGTGAAGGTGCAGAATCTTGAGCTGGAGGTTGTGGAGCTGAGGAGGTTGAACAAGGAGCTGCAGATGCAGAAGAGGAACCTCTCTTGCAGGCTCTCTTCTCTTGAGGCTCAGCTGGCTTGTCCTAACAAATCTTCTGAGAGTGACGTTGTTGCCAAAATTAAAGCCGAGGCATCATTGCTGAGGCTCACGAATGAAGACCTGTGCAAACAAGTAGAAGGTTTGCAGATAAGCAGATTGAATGAGGTTGAGGAGCTTGCCTACTTGAGGTGGGTGAATTCATGTTTAAGAAACGAGTTGAAGAACACATGCTCAGCGTTGGATTCGGATAAGCCATCTAGTCCTCATTCAGTTGTGAGCAGTAGTGATGATTGTGTTAGTTCTTTCTCTGATCAAACCAATAGGTATTCAAATTGTGGAAGTGCAAATAGGTTCAATATGGTGAAGAAGCCAAAAAAGTGGCCTATAACTAGTGATGATTTATCACAAGTAGAGTGCCAAGGTAGTCTCATTGAGAAGAATAGGATTGAATCAGATGTAGGGGGAAGCCCTAGAAGAAGACACTCTATCAGTGGATCAAACTACTCAGAGGAAGAGGTTTCTTTGAGTAAGAGAAGACAGTCAGATTGTTTTGTGTGTTCAAAAGAAATGGAAAAGGAATCAGTGGCATTGTCTGTTCAACAATCTGGTTTGGAGATTGTCCAAAGACCACAATATTTTAGCAATTGCCAAGAAGCTAACAAGCTTTTGGTTTCTTCAGATGTCGAGAAAAGAGCCCTACGCATTCCTAATCCACCTCCAAGGCCTTCATGTTCTATATCTATCAAGACAAAACAAGAAACTTCAGCTCAAGTTCCACTGCCTCCACCTCCACCTCCTCCCCCACCTCCTATGAATTTTGCATCAAGAAGTAACATGGCATCGGTGAAACGAGCGCCACAAGTGGTGGAATTGTACCATTCACTTATGAAGAGAGACTCAAGAAAGGATTCTTCAAATGGAGGACTCTCTGATGCACCAGATGTTTCTGATGTTCGTAGCAGCATGATTGGAGAAATTGAGAACCGTTCATCGCATTTGCTTGCTATAAAGGCAGATATTGAAACTCAGGGAGAATTCGTGAATTCATTGATAAGAGAGGTGAACGATGCAGTTTATCAGAACATAGAAGATGTAGTGGCATTTGTGAAGTGGCTGGATGATGAACTTTGCTTCCTTGTGGATGAGAGGGCTGTCCTTAAGCATTTTGATTGGCCAGAAAAGAAAGCTGACACATTAAGAGAAGCAGCATTTGGCTATCAAGATTTGAAAAAATTAGAATCTGAAGTTTCCTCTTACAAGGATGATCCCAGGCTACCTGGTGACATTGCTCTAAAGAAAATGGTTGCATTGTCAGAAAAGATGGAGCGTACAGTTTATAACCTTCTTCGCACAAGAGATTCATTAATGCGTCATAGCAAGGAGTTTAAAATTCCAATAGAATGGATGCTTGACAATGGAATTATTGGCAAGATAAAGCTAAGCTCGGTTAAATTGGCTAAAAAGTATATGAAAAGGGTAGCTATGGAACTTCAAGTAAAGTCAGCATTAGAAAAAGATCCTGCAATGGATTACATGCTTCTCCAAGGAGTGAGATTTGCTTTTAGAATCCATCAGTTTGCAGGAGGGTTTGATGCAGAAACAATGCATGCATTCGAGGAGCTTCGCAATCTGGCCTCTCTTCTTAACAAAACATGA 2532 0.425 MCMVATSREKLMSLVNVTKLPNNSCQSLNRCANSTMNFPEDPILLTKIEFLSATRVFLVLCHTMKEENPSENRSKASKFSDQNQAPKPQNTKGANLNNNNKTRLWGAHIVKGFSADKKTKSFASKKLTSSTTTTAISENVVTNQNNSNKPFVPSSHSRVKRSLIGDLSCSINPAQVHPHAFPTHRRQSSTDLFTELDHMRGLLQESKERESKLHAELSECRKKMTEVDEVVKRVGLLEQEKATLTEQLGAALSCEEVKGEEEQHKEVKVQNLELEVVELRRLNKELQMQKRNLSCRLSSLEAQLACPNKSSESDVVAKIKAEASLLRLTNEDLCKQVEGLQISRLNEVEELAYLRWVNSCLRNELKNTCSALDSDKPSSPHSVVSSSDDCVSSFSDQTNRYSNCGSANRFNMVKKPKKWPITSDDLSQVECQGSLIEKNRIESDVGGSPRRRHSISGSNYSEEEVSLSKRRQSDCFVCSKEMEKESVALSVQQSGLEIVQRPQYFSNCQEANKLLVSSDVEKRALRIPNPPPRPSCSISIKTKQETSAQVPLPPPPPPPPPPMNFASRSNMASVKRAPQVVELYHSLMKRDSRKDSSNGGLSDAPDVSDVRSSMIGEIENRSSHLLAIKADIETQGEFVNSLIREVNDAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFDWPEKKADTLREAAFGYQDLKKLESEVSSYKDDPRLPGDIALKKMVALSEKMERTVYNLLRTRDSLMRHSKEFKIPIEWMLDNGIIGKIKLSSVKLAKKYMKRVAMELQVKSALEKDPAMDYMLLQGVRFAFRIHQFAGGFDAETMHAFEELRNLASLLNKT 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02190 843 MobiDBLite consensus disorder prediction 75 99 - -
Gma17g02190 843 MobiDBLite consensus disorder prediction 442 463 - -
Gma17g02190 843 MobiDBLite consensus disorder prediction 543 568 - -
Gma17g02190 843 Coils Coil 262 303 - -
Gma17g02190 843 PANTHER PROTEIN CHUP1, CHLOROPLASTIC-LIKE 64 843 - -
Gma17g02190 843 MobiDBLite consensus disorder prediction 549 565 - -
Gma17g02190 843 MobiDBLite consensus disorder prediction 67 99 - -
Gma17g02190 843 Coils Coil 203 223 - -
Gma17g02190 843 Coils Coil 227 247 - -
Gma17g02190 843 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 64 843 IPR040265 -
Gma17g02190 843 MobiDBLite consensus disorder prediction 589 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02190 Gma-Chr17 39599993 39607185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02190 - - gmx:100778600 1415.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02190 17 39599993 39607185 Gma14g00858 14 9213118 9218550 GST