LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma17g02186	ATGGAGAATGCAGACATCCCTGAGAATGCCAACGAGCATTGCCCAGGTCCTCAGTCTGAATCTGCTGGAAAATCTGATGCATGTGAAGGGTGCCCGAATCAACAAATTTGTGCCACTGCCCCCAAAGGACCTGACCCTGATCTGGTTGCCATTGCAGAAAGAATGGCTACTGTGAAACATAAGATATTGGTCTTGTCAGGAAAGGGAGGAGTTGGCAAGAGCACGTTCTCTGCCCAACTGGCGTTTGCTTTAGCTGCAAGGGATTTTCAGGTGGGTCTTCTTGACGTTGATATTTGTGGTCCAAGCATTCCAAAGATGCTTGGCCTAGAAGGTCAAGAGATACATCAGAGCAACCTTGGTTGGTCCCCTGTCTATGTAGAGTCCAACCTTGGGGTCATGTCAATTGGGTTCATGCTTCCCAATCCAGATGAAGCTGTTATATGGAGAGGCCCACGCAAAAATGCACTTATCAAGCAGTTTCTAAAAGATGTCTACTGGGGAGAACTTGATTTTCTAATTGTTGATGCTCCACCAGGAACCTCAGATGAACACATTTCCATTGTTCAATTCCTTGATGCCACTGGAGTAGATGGTGCAATCATAGTTACTACACCTCAACAAGTCTCTCTTATTGATGTGAGAAAAGAAGTGAATTTTTGCAAGAAAGTTGGCGTGAAAGTTCTCGGGGTTGTAGAGAATATGAGTGGCCTGTGCCAGCCTATCACAGATTTCAAGTTTATGAAGTTGACCGATAATGGCGAGCAGAAAGATGTTACACAGTGGGTTTGGGAATACATGAGAGAAAAAGCACCAGAAATGCTGAATTTGCTTGCTTGCACTGAAGTGTTTGATAGTAGTGGTGGTGGAGCAGTGAAAATGAGCAATGATATGGGGGTACCCTTTCTTGGTAATGTTCCTTTAGATCCACAGCTTTGTAAGGCAGCTGAAGAAGGTTCATCCTGCTTTGCTAAGAAAGATTGTGTTGTTAGTGCTCCAGCACTAAACAAGATTATAGAGCAGTTGATTGAAACTAATGGGTGGTCAATGTTAGTAAGTAATGGAGTGTAG	1068	0.441	MENADIPENANEHCPGPQSESAGKSDACEGCPNQQICATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLAFALAARDFQVGLLDVDICGPSIPKMLGLEGQEIHQSNLGWSPVYVESNLGVMSIGFMLPNPDEAVIWRGPRKNALIKQFLKDVYWGELDFLIVDAPPGTSDEHISIVQFLDATGVDGAIIVTTPQQVSLIDVRKEVNFCKKVGVKVLGVVENMSGLCQPITDFKFMKLTDNGEQKDVTQWVWEYMREKAPEMLNLLACTEVFDSSGGGAVKMSNDMGVPFLGNVPLDPQLCKAAEEGSSCFAKKDCVVSAPALNKIIEQLIETNGWSMLVSNGV	355

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma17g02186	355	ProSitePatterns	Mrp family signature.	166	182	IPR000808	GO:0005524
	Gma17g02186	355	Hamap	Iron-sulfur cluster carrier protein.	53	342	IPR019591	GO:0005524\|GO:0016226\|GO:0051536\|GO:0140663
	Gma17g02186	355	Gene3D	-	54	348	IPR027417	-
	Gma17g02186	355	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	45	320	IPR027417	-
	Gma17g02186	355	MobiDBLite	consensus disorder prediction	1	27	-	-
	Gma17g02186	355	Pfam	NUBPL iron-transfer P-loop NTPase	58	246	IPR033756	-
	Gma17g02186	355	Pfam	NUBPL iron-transfer P-loop NTPase	279	341	IPR033756	-
	Gma17g02186	355	Hamap	Cytosolic Fe-S cluster assembly factor NUBP1 [NUBP1].	7	346	IPR028601	GO:0016226\|GO:0051536\|GO:0051539
	Gma17g02186	355	PANTHER	NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED	1	342	IPR019591	GO:0005524\|GO:0016226\|GO:0051536\|GO:0140663
	Gma17g02186	355	PANTHER	CYTOSOLIC FE-S CLUSTER ASSEMBLY FACTOR NBP35	1	342	-	-
	Gma17g02186	355	CDD	Mrp_NBP35	60	313	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma17g02186	Gma-Chr17	39537474	39543262	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma17g02186	-		-	gmx:100777003	719.539

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma17g02186	17	39537474	39543262	Gma14g00863	14	9261600	9263890	GST