Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02180 ATGGAGATCAATGGAGAGGGTGCATCCCCACACAGCATAAATTCTATCAAGTTCAAGGTACCTGAGAAACAGCCTTATAGAACTTGGTACCACTTTCAACCCCCACAAAATTGGATGAACGCACCTATGTACTACAAAGGAGTTTACCACTTTTTCTACCAACATAACCCCTATGCACCAACCTTTGGCGAGAAAATGGTGTGGGCTCACTCTGTGTCCTATGATCTCATCAATTGGATTCATCTGAATCATGCCATTGAACCAAGTGATTCCTATGACATCAACAGCTGCTGGTCAGGCTCAGCCACAATACTCCCAGGTGAAGAAGAACAACCTGTTATTTTGTACACAGGAATTGATAACAATAAATATCAAGTTCAGAACATGGCTATGCCAAAGGATCTATCAGACCCTTTCTTAAGGGAATGGGTGAAACACCCTCAGAACCCTGCCATGACACCACCAAGTGGTGTTGAAGTGAATAACTTCAGAGACCCTTCAACTGCTTGGCAGGGAAAGGATGGAAAATGGAGGGTAGTCATTGGTGCTCAAAATGGGGATGAAGGGAAGACAATTCTCTACCAAAGTGAGGATTTTGTTAATTGGAGAGTGGAATTGAACCCTTTTTTTGCAACAGATAACACTGGAGTTTGTGAGTGTCCAGATTTTTTTCCTGTGTCCATCAATAGCACAAATGGGGTGGATGCATCTGTCCAAAGTCAAAGTGTTAGACATGTCTTGAAGATAAGCTATCTACGTAGACATCAGGACTATTATTTTCTTGGTAAATATGTCTATGATGAGGGGAACTTTGTTCCTGATGTTAAATTCACAGGAACTAGTTCGGACTTAAGGCTTGACTATGGTAAGTTTTATGCTTCAAagtcattttttgaccatgctaagaacaggaggatattgtggGGGTGGGTGAACGAGTGTGACACTAGACAAAATGACATTGAGAAAGGATGGGCTGGTCTACAGTGTATTCCAAGGCAAGTTTGGCTTGATGAAAGTGGGAAGCAGTTGATGCAGTGGCCAATTGAAGAAATAGAAAAACTACGCGACAAACAAATTAGCATATTGGGGGAGAAACTGGTTGGTGGATCAATTATTGAAGTCTCAGGTATCACTGCATCACAGGCCGATGTAGAAGTGTTGTTTGAGCTACCCGAACTAGAGAATGTGGAGTGGCTAGATGAAAGTGAAGTTGATCCCCACTTGCTGTGTAGTGAAGAGTATGCAACAAGAAGTGGCACAATAGGGCCATTTGGTTTGTTAGCTTTAGCTTCTGAGGACCAAACAGAACACACTGCAGTGTTCTTCAGAATATATAGAGCTTCCAATAGATATATATGCTTCATGTGCAGTGACCAAAGCAGGTCTTCATTGCGGCAGGACCTTGATAAAACCACATATGGAACAATCTTTGACATTGACCCTAATGTCAAAACGATTTCACTTAGAAGTTTGATTGACCGCTCAATTATTGAGAGTTTTGGGGAGAAAGGGAGAATTTGTATTACCAGTAGAGTTTATCCCTCGATGTCTATAGACAAAAATGCACATCTTTATGTGTTCAACAATGGAAGCCAGAGTGTGGTGATCTCTGAACTGAATGCTTGGAGCATGAAGCAAGCAGAATTTGGCCAAGAAGAAAGCATAAATAAGCAGTAG 1680 0.4071 MEINGEGASPHSINSIKFKVPEKQPYRTWYHFQPPQNWMNAPMYYKGVYHFFYQHNPYAPTFGEKMVWAHSVSYDLINWIHLNHAIEPSDSYDINSCWSGSATILPGEEEQPVILYTGIDNNKYQVQNMAMPKDLSDPFLREWVKHPQNPAMTPPSGVEVNNFRDPSTAWQGKDGKWRVVIGAQNGDEGKTILYQSEDFVNWRVELNPFFATDNTGVCECPDFFPVSINSTNGVDASVQSQSVRHVLKISYLRRHQDYYFLGKYVYDEGNFVPDVKFTGTSSDLRLDYGKFYASKSFFDHAKNRRILWGWVNECDTRQNDIEKGWAGLQCIPRQVWLDESGKQLMQWPIEEIEKLRDKQISILGEKLVGGSIIEVSGITASQADVEVLFELPELENVEWLDESEVDPHLLCSEEYATRSGTIGPFGLLALASEDQTEHTAVFFRIYRASNRYICFMCSDQSRSSLRQDLDKTTYGTIFDIDPNVKTISLRSLIDRSIIESFGEKGRICITSRVYPSMSIDKNAHLYVFNNGSQSVVISELNAWSMKQAEFGQEESINKQ 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02180 559 Pfam Glycosyl hydrolases family 32 C terminal 351 544 IPR013189 -
Gma17g02180 559 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 21 554 - -
Gma17g02180 559 CDD GH32_Fruct1-like 37 337 - -
Gma17g02180 559 SMART glyco_32 31 505 IPR001362 GO:0004553|GO:0005975
Gma17g02180 559 SUPERFAMILY Arabinanase/levansucrase/invertase 23 349 IPR023296 -
Gma17g02180 559 Gene3D - 361 545 - -
Gma17g02180 559 SUPERFAMILY Concanavalin A-like lectins/glucanases 348 547 IPR013320 -
Gma17g02180 559 Gene3D Glycosyl hydrolase domain; family 43 36 360 IPR023296 -
Gma17g02180 559 Pfam Glycosyl hydrolases family 32 N-terminal domain 31 348 IPR013148 -
Gma17g02180 559 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 21 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02180 Gma-Chr17 39467907 39470887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02180 40 550 Glycoside Hydrolase AT1G55120 53.167 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02180 - K01193 gmx:100806220 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02180 17 39467907 39470887 Gma17g02180 17 39467907 39470887 ECH