Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02171 ATGCAAAAAGTAAATACATCACCTCAATATGATGTACCTGTCTCAGCACATGGTAGTGAGGGTACAAATCCTGCTGATGCTGCTATGTGTGGAATAAAAATCGTCTCTGTTGGAACTGAGGCCAAGGGAAAGATTGATATAGAAGAGTTGAGGAAGATTTGCAAGATTATCCATGATAATGGAGGCCAAGTATATATGGGTGGTGCCAACttgaatgctctcagGAATTGTTCTCGGGGTAGATTGTTCAGGATGATATTGTATTACCGAAGACATATAGTTCATGGAACTAATTTCTCTCTATTTTTTAATCTTCTCCAAATTATGAATGTTCAAATGTTCAATCTCCATAAGACATTTTGCATCCCTCATGGAGGAAAATGCCCTGGCATGGGTCCTATTAGTGTAAAGAGACACTTGGCTCCATTTTTACCTTTCACACCCTCAACTGGTGGAATTCCTGCCCCTGACAAACATCAACCACTTGTTACCATCGCTGCTGCACCATGGGGCTCAGCACTCATATTGCCAATCTCTTACACTTACATAGCCATGATGGGTTCTAAAGGACTCACCGATGCATCAAAGATAGCCATTTTGAATGCAAACTACATGGCAAAACGATTGGAGTTTTTCAATGGAACAGTTGCTCATGAATTCATCATTGACCTGAGAGGCTTTAAGAATACTGCTGGAATTGAGCCTGAAGATGTTGCAAAGCGCCTCATGGACTACGGTTTTCATGCACCAACAATGTCATGGCCTGTGCCTGGCACACTCATGATTGAGCCAACTGAGAGTGAAAGCAAGGCTGAACTAGACAGGTTCTGTGATGCTCTTATTTCCATTAGACATGAAATTGCTGAGATTGAGAAAGGAAATGCTGACATTAACAACAATGTACTTAAGAGCGCCCCTCATCCACCATCACTGCTCATGGCTGATGCATGGACAAAACCATACTCCAGGGAATATGCAGCCTTCCCAGCTCCTTGGCTCCGTGCTTCAAAGTTCTGGCCTACCACAGGACGTGTTGATAATGTGTACGGTGACCGCAACCTGATTTGCACCCTTCTGCCAGCATCACAGGCTGTTGAAGAACAAGCTGCCGCCACAGCATAG 1122 0.4323 MQKVNTSPQYDVPVSAHGSEGTNPADAAMCGIKIVSVGTEAKGKIDIEELRKICKIIHDNGGQVYMGGANLNALRNCSRGRLFRMILYYRRHIVHGTNFSLFFNLLQIMNVQMFNLHKTFCIPHGGKCPGMGPISVKRHLAPFLPFTPSTGGIPAPDKHQPLVTIAAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLEFFNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRHEIAEIEKGNADINNNVLKSAPHPPSLLMADAWTKPYSREYAAFPAPWLRASKFWPTTGRVDNVYGDRNLICTLLPASQAVEEQAAATA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02171 373 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 12 52 IPR020581 GO:0004375|GO:0006546
Gma17g02171 373 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 53 73 IPR020581 GO:0004375|GO:0006546
Gma17g02171 373 Gene3D Aspartate Aminotransferase, domain 1 180 311 IPR015422 GO:0003824
Gma17g02171 373 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 111 373 IPR020581 GO:0004375|GO:0006546
Gma17g02171 373 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 12 52 - -
Gma17g02171 373 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 53 73 - -
Gma17g02171 373 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 111 373 - -
Gma17g02171 373 SUPERFAMILY PLP-dependent transferases 15 358 IPR015424 -
Gma17g02171 373 Gene3D - 109 161 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02171 Gma-Chr17 39352002 39355589 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02171 K00281 - gmx:100777528 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02171 17 39352002 39355589 Gma17g02171 17 39352002 39355589 ECH