Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02153 ATGGGTGAAGCTCCAGAGGTGTTCTACATTAATGGGTTCTCAAAGTTTGAACATGAAATTGAAACCCAACAAAACCATCATGTGAATGATCAGAACCATGATTCTTCTTGGTACGAGGAAATCATCGATGAGGATCTAAAATGGTCTTTTAAACTCAACAGTGTGCTCCATAAAGCCATTAGCGAGTACCAGGACATAGCTCTCTTAGATACAAAGCGTTTTGGAAAGGCCTTGGTGCTTGATGGAAAGATGCAGAGTGCTGAAACGGACGAATTTATTTATCATGAATGCTTGATTCATCCACCTCTTTTATGCCATCCTAATCCCAAGACTGTGTTTATAATGGGGGGAGGTGAAGGTTCTGCTGCTAGGGAAGCCCTTAAGCACAGGTCAATGGTCAGAGTGGTCATGTGCGATATAGACAAGGAGGTGGTAGATTTCTGCCGAAAATACTTGATTGCAAATAAGGAGGCGTTTTCTCATAAGAAGCTCGACCTTGTCATTAATGATGCCAAGGCTGAATTGGAGAAAAGAAAGGAGAAGTTTGATATCATCGTTGGAGATTTGGCAGACCCACTTGAAGATGGGCCTTGCTATCAACTCTACACCAAATCCTTCTACGAGAAGATCCTGAAGCCCAAGCTCAATGATAATGGCATTTTTGTGACCCAGGCTGGACCAGCAGGTATCTTCACACACAAGGAGGTCTTCACTTCTATATATAACACAGTCAAACAGGTTTTCAAATATGTGATTGCATACACGACTCATGTACCATCATTTGCTGACACATGGGGTTGGGTTATGGCTTCGGACCAACCACTATCGATTTGCGCTGATGAAATGGACAGAAGAATCGAAGCAAGAATAGATGGGGAACTTCTCTATCTAAATGGTGCTTGGTTCCATTCATCTACAACTATGAACAAAACTGTTTACCAATCGCTGCAAAATGAAACTCACGTGTACACAGAAGAAAATGCTAGATTTATTCCTGGACATGGCATGGCTTTTCATCTCTAA 1023 0.4194 MGEAPEVFYINGFSKFEHEIETQQNHHVNDQNHDSSWYEEIIDEDLKWSFKLNSVLHKAISEYQDIALLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPPLLCHPNPKTVFIMGGGEGSAAREALKHRSMVRVVMCDIDKEVVDFCRKYLIANKEAFSHKKLDLVINDAKAELEKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTVKQVFKYVIAYTTHVPSFADTWGWVMASDQPLSICADEMDRRIEARIDGELLYLNGAWFHSSTTMNKTVYQSLQNETHVYTEENARFIPGHGMAFHL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02153 340 Gene3D Vaccinia Virus protein VP39 88 339 IPR029063 -
Gma17g02153 340 Gene3D Spermidine synthase, tetramerisation domain 35 87 IPR037163 -
Gma17g02153 340 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 1 338 - -
Gma17g02153 340 Pfam Spermidine synthase tetramerisation domain 37 88 IPR035246 -
Gma17g02153 340 CDD AdoMet_MTases 116 224 - -
Gma17g02153 340 Hamap Polyamine aminopropyltransferase [speE]. 36 317 IPR001045 GO:0003824
Gma17g02153 340 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 35 272 IPR030374 -
Gma17g02153 340 Coils Coil 161 181 - -
Gma17g02153 340 PANTHER BNAA02G04280D PROTEIN 1 338 - -
Gma17g02153 340 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 36 317 IPR029063 -
Gma17g02153 340 Pfam Spermine/spermidine synthase domain 91 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02153 Gma-Chr17 39049565 39055222 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02153 K18787 - gmx:100815510 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02153 17 39049565 39055222 Gma17g02153 17 39049565 39055222 ECH
Gma17g02153 17 39049565 39055222 Gma14g00897 14 10036455 10041900 GST