Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02146 ATGGATTTCAGAGTGATGGGTTTGGAGTCTCCACTGTTCCACACGCTGCAACACATGATGGACATGTCAGAGGACGGTGCAGGAGACAACAAGACACACAATGCTCCAACATGGTCATACGTTCGAGACGCGAAAGCAATGGCTGCAACACCTGCGGATGTGAAGGAGTATCCGAATTCTTACGTGTTCGAGATCGACATGCCGGGTTTGAAATCTGGGGACATAAAGGTTCAAGTTGAAGACGACAACCTGCTTCTGATATGTGGGGAACGAAAGAGGGACGAAGAGAAAGAAGGGGCGAAGTATTTGAGAATGGAGAGAAGGGTTGGGAAGTTAATGCGCAAGTTTGTGCTGCCTGAGAATGCCAACACTGATGCAATCTCTGCTGTGTGCCAAGATGGTGTGCTTAGTGTAACCGTGCAGAAATTGCCTCCACCTGAGCCTAAGAAACCTAGGACTATTCAGGTTAAGGTTGCTTGA 480 0.4833 MDFRVMGLESPLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKVA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02146 159 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 8 158 - -
Gma17g02146 159 Gene3D - 5 158 IPR008978 -
Gma17g02146 159 SUPERFAMILY HSP20-like chaperones 29 151 IPR008978 -
Gma17g02146 159 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 43 157 IPR002068 -
Gma17g02146 159 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 8 158 - -
Gma17g02146 159 Pfam Hsp20/alpha crystallin family 53 157 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02146 Gma-Chr17 38985795 38986348 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02146 K13993 - gmx:100813195 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02146 17 38985795 38986348 Gma17g02146 17 38985795 38986348 ECH
Gma17g02146 17 38985795 38986348 Gma14g00906 14 10169750 10170463 GST