Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02103 ATGGAACAACACCACCACCAACAACCTCAACCCAACAACAATGGTTCCAACACCACCACCACCACCACCGACCCTTTCCTCCTCAACTACACCACCTCGGATCTCCGAACCGCTTCGGAGTTTCTCGCCACGTGGCTCCCTTTCCTCTCACGAGATCTCTGCACTCGATGCACTATATTCCTCTCCGATCGCGTCCGCTCCATCGACCCAGGTGAAGCGCCTCAAGATGACACCCCCAATGACCAAAACGACATGGACGTCGAAGATAACTGCGACAACCATTCTCTCGGGAGTTGGAAGGACGGGGCGGAGGTGAATTCTTCCAATGTGGAGACTCCGAGCCAGAGAATGTCTTGGGCCGACATGGCCCAAGAAGACGACGAGTTTGGCGTAGAAGAAGACAACAACAACAATGGTGGGAATGTTGTTATGGGTGATTCGAATGCTTCCTCTGATGTTGCCAAGGTTGAGAAGCCTACTCTGCCGAGGGAACAGAGGGAGTACATTAGGTTCATGAATGTGAGGCGAAAGAAGGACTTTATCTGCTTTGAGAGGGTTCATGGGAAGCTTGTGAACATTCTCGAAGGGCTTGAACTGCACACTGGGATTTTCAGTGCTGCTGAACAGAAGAGGATTGTTAATTATGTCGCCTCGTTGCAGGAGATGGGGAAAAAGGGAGAATTGAAAGAGCGGACGTTTTCAGCTCCCCAGAAGTGGATGAGGGGCAAGGGACGCCAAACCATCCAATTTGGGTGCTGTTACAATTATGCAGATAGAGATGGTAACCCACCTGGTATTCTTACGAATGGAATGGTTGATCCTATACCTGATCTTTTCAAGGTCATCATTCGACGTCTGGTCAAGTGGCATGTACTCCCTCCTACTTGTGTGCCAGATAGTTGCATTGTTAATATCTATGAAGAAGGGGACTGTATACCTCCACATATAGATAATCATGACTTTGTTCGACCGTTTTGCACTGTCTCATTTCTTAGTGAGTGCAATATAGTTTTTGGATCAAACTTAAAGATTGTAGGCCCTGGTGAATTTGATGGCTCAATTGCTATTCCGTTACCTATGGGATCTGTACTTGTCTTGAATGGAAATGGGGCTGATGTAGCTAAACATTGTGTGCCTGCAGTTCCTACAAAAAGGATATCGATCACATTTAGAAGAATGGATGTGGCCAGGCGGCCATTTGGGTATGTTCCAGAACCCGATCTTCAGGGGATCCAACCATTGGCCTATGAAGTTGAGCAGGAAAAGAAATCAAGTGGGCACAGACCTAGTCGTCACACAAACAGACATAAAGTCAGGAGAGGAGGTGGCAGGAATGATGCATTGGgatctgcaactagaaatgataggttctcagagccccgtgactcaaatctaagttcatcaagatctgcatctagaaatgataggttctcggagccccatgactcgaatctaagttcctcaagatctgcaAATAGGTGGAGTAGGAAGCCTGGTAGTTAA 1503 0.4371 MEQHHHQQPQPNNNGSNTTTTTTDPFLLNYTTSDLRTASEFLATWLPFLSRDLCTRCTIFLSDRVRSIDPGEAPQDDTPNDQNDMDVEDNCDNHSLGSWKDGAEVNSSNVETPSQRMSWADMAQEDDEFGVEEDNNNNGGNVVMGDSNASSDVAKVEKPTLPREQREYIRFMNVRRKKDFICFERVHGKLVNILEGLELHTGIFSAAEQKRIVNYVASLQEMGKKGELKERTFSAPQKWMRGKGRQTIQFGCCYNYADRDGNPPGILTNGMVDPIPDLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKIVGPGEFDGSIAIPLPMGSVLVLNGNGADVAKHCVPAVPTKRISITFRRMDVARRPFGYVPEPDLQGIQPLAYEVEQEKKSSGHRPSRHTNRHKVRRGGGRNDALGSATRNDRFSEPRDSNLSSSRSASRNDRFSEPHDSNLSSSRSANRWSRKPGS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02103 500 Gene3D - 181 397 IPR037151 -
Gma17g02103 500 SUPERFAMILY Clavaminate synthase-like 193 393 - -
Gma17g02103 500 MobiDBLite consensus disorder prediction 100 117 - -
Gma17g02103 500 MobiDBLite consensus disorder prediction 1 25 - -
Gma17g02103 500 MobiDBLite consensus disorder prediction 68 117 - -
Gma17g02103 500 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 297 394 IPR005123 -
Gma17g02103 500 PANTHER RNA DEMETHYLASE ALKBH9B 104 475 - -
Gma17g02103 500 PANTHER RNA DEMETHYLASE ALKBH9B 18 102 - -
Gma17g02103 500 MobiDBLite consensus disorder prediction 483 500 - -
Gma17g02103 500 MobiDBLite consensus disorder prediction 418 500 - -
Gma17g02103 500 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 104 475 IPR044842 GO:0003729|GO:0006402|GO:0032451
Gma17g02103 500 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 18 102 IPR044842 GO:0003729|GO:0006402|GO:0032451
Gma17g02103 500 Pfam 2OG-Fe(II) oxygenase superfamily 197 391 IPR027450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02103 Gma-Chr17 38418209 38421684 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02103 K10767 - gmx:100787321 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02103 17 38418209 38421684 Gma14g00971 14 11351564 11355799 GST