Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02066 ATGGCTTCTTCTCTCATTCGAACGCTCCAAAGAGCTTCTACATCGCTCATTCGAACCCCGAGAGTGTCAAGCGCATGCTTTGCCACGTCGCGTGTCGGAGCCAGAACCTACGCAGCAGAACCAGAACCCGCGACCAAATCGCCCTTTGATTCCAACATCATACGAATTCTCCGAAACGAAATCGAGTATCAAGAAGAATACGCTCCTCCACACCAGCCTGAGACTCAATTCAATTCGTTTACGGTTGAAGAGCGACGTGGGGAGCAAGTGGTCACAATTAAGGGAAAATTTGGGGAATTTGAGGATGTTAAAATTGAGGCTACCATGTTTGATTGGTGTGAGCATGTTCCTGCGTGTGGAGATGATAGTTCTGGGGTAAATATGCGTCTTCACCTTAGTTTAATTGTGGACATAGCAAAAGGGGATGGTGACAGTGAGTTAGAGTTTGTGTGCTCGGCGTGGCCGGATTGTTTGAATGTTGAGAAAGTTTACATGTTAAGGCGTGGCCGGATGGCGGCTAGGCCTTACGTTGGACCTGATTTCAGGGATTTGAAGGCTAAAGTTCAGGAGAAGTTTTACGAGATAGAATTGAGCTTCTGCGGTGGATGGATAGTCTCAAGTCTTTTATGGAAAGATAGATTGAGCATTTCAGCGGACACACCTTTTGGCATATTGGTTGGATCCCTTGTTGAGTGTAAAAACAAATGTTTCATCGCGATCCTTGACATCGTGGGAAATTGCAGTCACAATTGTGATCACGATGTGGTCTCTGAGAGTCCAAAAACCTTGACGGTTCGAGCTGAAATCGCGGCTTTGGTTCAGACTTCAGAGCTTGAGGGACAAATCAAGGTGCTTCATTTCTTCTTGATTAGTAGTAGTCTTCAAACAAGTTCCACCACTAGCCACACATCCACCGATTTCTTTATTACTGGCTGCAGAATTCAACATGCAAGCTTTGCTATTCCGGATCCAAAAGGTGGGGTACTTGGACTTGGGGGAGCCTCTGGTGGAGGAGCAGAAGAAGAGAAGATGCTTGAACTTGTCGGCTATTGGAAAACCAGCGATAAGGTACCGTTTGGAGTTGGCATTGGGGCACAACTGCACAACAAGGACAAAGAAGAGAAATTATGGAGTGATAGGATCACGCGGCCTTAA 1155 0.4632 MASSLIRTLQRASTSLIRTPRVSSACFATSRVGARTYAAEPEPATKSPFDSNIIRILRNEIEYQEEYAPPHQPETQFNSFTVEERRGEQVVTIKGKFGEFEDVKIEATMFDWCEHVPACGDDSSGVNMRLHLSLIVDIAKGDGDSELEFVCSAWPDCLNVEKVYMLRRGRMAARPYVGPDFRDLKAKVQEKFYEIELSFCGGWIVSSLLWKDRLSISADTPFGILVGSLVECKNKCFIAILDIVGNCSHNCDHDVVSESPKTLTVRAEIAALVQTSELEGQIKVLHFFLISSSLQTSSTTSHTSTDFFITGCRIQHASFAIPDPKGGVLGLGGASGGGAEEEKMLELVGYWKTSDKVPFGVGIGAQLHNKDKEEKLWSDRITRP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02066 384 Gene3D Mitochondrial glycoprotein 49 195 IPR036561 -
Gma17g02066 384 PANTHER COMPLEMENT COMPONENT 1 1 194 IPR003428 GO:0005759
Gma17g02066 384 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 49 194 IPR036561 -
Gma17g02066 384 Pfam Mitochondrial glycoprotein 58 193 IPR003428 GO:0005759
Gma17g02066 384 PANTHER BNAA03G51840D PROTEIN 1 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02066 Gma-Chr17 37664614 37680760 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02066 K15414 - gmx:100786969 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02066 17 37664614 37680760 Gma17g02066 17 37664614 37680760 ECH
Gma17g02066 17 37664614 37680760 Gma14g01046 14 13092981 13094326 GST