Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02064 ATGTTCTTCCTCTCTTCCCCCTTCTCTTCATGCTTCAGAGCTTCACAACGTACCAACCACGATCCCACAAACCTCACCACCTACATCTACCACACCGAATACGGCACCGTTTCACTGACATGGTCGCGCTCCCTGCTAGGCCGCTCCCTCCACGTGAACCTCCACAACCGTTCCTCCTTCCACCTCCTCCTCAAGCCATGGAAGAAAAACGGGTCCAAGAAGCTTTCTCACAATACGGTCTTCCTCTGGAACCTCTCCAACGCGAGGTTCGAGTCTGGACTCGAACCTCGCTCTAGATTCTACCTCGCCATCGAGGTAGAACATGGCCTCAGCCTACTCATTGGGGACTTATCCCCCAGGAGTAGTAAGGCCAAGAAGCCCAGCAAAACAAACCAATTACTCGTCCTGAAGCGGGACAACGTCCACGTGGCGCCACACCGCAGCCGGGTGTACCAAACCAAAGCGAAACTCGGAGGTAAGGTTAGGGAAATCGAAATAGATTGCGACGTTTACAACTGTGGCGGATACGGGTACGAGAACGAGAATAGTTCGAGGTTGTTGTTCAGTGTGGATGGAGAGAAGGTTCTTGAAGTGGCGAGGCTGAAGTGGAAGTTCAGAGGGAGCGAGCGTGTGGAGATCGACGGGGTGCACGTGCAGATCTCGTGGGACGTGCACGATTGGCTTTTTGAGAAGGATAAGGATATTGTTAATCATCGTAGTAGTAACAACAACAATAGTAATAATAATGGTATCGAGGGTCACGCGGTTTTCATGTTTAAGTTCGAGGAGGACGAGGTACGAGGTAGTGGTGGTGGGAAAGAGGAGGAGCAACAGTGGAGTATGGGGAGTGGTGGGGAGTGGAGGAATGGCAAGAGTTGGTCTTCTTCGTCTTTGTCGGTGTCTTCTACTTCTGGTGGATCTTTTGGGGGAAGTTCTTCGGTTATGGAATGGTCCAGTGTGGAGGAGAATGAGTTGGTGGTTCCTCTTGGGTTTTCTTTGGTGGTTTATGCTTGGAGAAGGTGA 1023 0.5132 MFFLSSPFSSCFRASQRTNHDPTNLTTYIYHTEYGTVSLTWSRSLLGRSLHVNLHNRSSFHLLLKPWKKNGSKKLSHNTVFLWNLSNARFESGLEPRSRFYLAIEVEHGLSLLIGDLSPRSSKAKKPSKTNQLLVLKRDNVHVAPHRSRVYQTKAKLGGKVREIEIDCDVYNCGGYGYENENSSRLLFSVDGEKVLEVARLKWKFRGSERVEIDGVHVQISWDVHDWLFEKDKDIVNHRSSNNNNSNNNGIEGHAVFMFKFEEDEVRGSGGGKEEEQQWSMGSGGEWRNGKSWSSSSLSVSSTSGGSFGGSSSVMEWSSVEENELVVPLGFSLVVYAWRR 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02064 340 Pfam Plant protein of unknown function (DUF868) 23 339 IPR008586 -
Gma17g02064 340 PANTHER OS08G0422401 PROTEIN 4 339 - -
Gma17g02064 340 MobiDBLite consensus disorder prediction 267 294 - -
Gma17g02064 340 PANTHER EXPRESSED PROTEIN 4 339 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02064 Gma-Chr17 37646198 37647648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02064 24 260 EF-hand Containing Proteins AT5G28150 32.677 4.02e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02064 - - gmx:100819926 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02064 17 37646198 37647648 Gma14g01048 14 13144205 13146113 GST
Gma17g02064 17 37646198 37647648 Gma04g00583 04 5287390 5288415 PCT
Gma17g02064 17 37646198 37647648 Gma06g00569 06 5085163 5094133 PCT
Gma04g00583 04 5287390 5288415 Gma17g02064 17 37646198 37647648 PCT
Gma06g00569 06 5085163 5094133 Gma17g02064 17 37646198 37647648 PCT