Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02056 ATGGAGCCGGAAGTGAGCATCGAGGGATCGGCGATGATCCAGGTGGCGGTGGTTCCAATCGGAGCGGTGCCGGCGAACGTGCTGCGGGACTACTACTCTATGCTGCTCCCGCTGCACACGATCCCGCTCTCCGCGATCAGCTCCTTCTACACCGAGCACCAGAAGTCCCCCTTCGCCGTCCAGCCCTGGGACTCCGGCTCCCTCCGCTTCAAGTTCGTCCTCGGTGGCGCGCCGCCGAGTCCATGGGAGGACTTCCAGTCGCACCGCAAAACCCTCGCCATCGTCGGCGTCGTCCACTGCCCCTCCTCCCCCGATCTCGAAGCCGTCGTCGACGTCTTCGCCAGTGCCTGCAAGTCCTTCCCTTCCTCCCTCGTCGATCGCTGTTTCGCCTTCTGCCCAAACGATACGCAGCTTGAGGATGGAAGTAAGAAAGGTGGGAATTTGAGGTTGTTTCCTCCTGCGGATCGTCCGACTTTGGAGTTCCACTTGAATACTATGATGCAAGAGATCGCTGCGTCGCTGCTTATGGAGTTTGAGAAATGGGTACTTCAAGCAGAATCTTCTGGAACCATTCTCAAGACGCCTTTAGATTCTCAAGCTAGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAGAGAAGGCTTGGGCGTGCCCAGAAGACCATTGGTGATTACTGTTTGCTGGCTGGGTCCCCCGTTGATGCCAATGCTCATTATTCTACTGCATTGGAACTTTCGAGGTTAACTGGTGATTACTTCTGGTATGCTGGAGCATTGGAGGGTAGTGTTTGTGCCTTGCTGATTGACCGTATGGGCCAGAAAGATTCAGTCCTGGAAGACGAAGTTAGATATCGTTATAATAGTGTCATCTTGAATTACAAGAAGTCACAAGATAATGCTCAGCGAGTTTCTCCCCTAACTTTTGAACTTGAAGCTACTTTGAAATTAGCAAGGTTTCTTTGCAGGAGAGAGCTGGCCAAGGAGGTGGTGGAGTTGTTGACCACTGCTGCAGATGGTGCTAAATCTTTAATCGATGCAAGTGATAAGCTCATATTATATATTGAAATAGCTCGTCTGTATGGAAGTCTTGGATACCAAAGAAAAGCTGCATTCTTCTCAAGGCAGGTTGCACAGTTATATCTGCAGCAAGAAAATAGACTGGCTGCAATTAGTGCTATGCAAGTTTTGGCAATGACCACAAAAGCTTATCATGTTCAAAGTAGATCATCAATCTCTGATCATTCTTTGCACAGTAAGGGAATTGTATCAAATAATGCTGATAGTGGGAAAACATATCACCAATCAGCAGTCTCACTATTTGAGTCTCAATGGAGTACCCTCCAGATGGTTGTGTTAAGAGAAATTCTGCTCTCTGCTGTCCGTGCTGGTGATCCTCTTACTGCATGGAGTGCAGCAGCACGACTTCTTAGGTCCTACTATCCTCTAATAACACCTGCTGGGCAAAATGGCCTTGCTAATGCACTTTCAAATTCAGCTGAGAGGCTGCCACCAGGGACTCGTTGTGCTGATCCTGCTTTACCCTTTGTGAGGCTGCATTCCTTTCCTCTCCACCCAACACAAATGGACATAATAAAGCGTAGTACTGCTAGAGAAGACTGGTGGGCGGGTGCTGCTCCTTCAGGCCCTTTCATTTATACACCATTCAGTAAAGGAGAGCCTAATAATATCAAGAAGCAAGAGCTTATTTGGATTGTTGGAGAGCCTGTTGAGGTCTTGGTGGAATTGGCAAACCCATGTGGCTTTGATTTAAGGGTTGATAGCATCTATCTATCTGTGCATTCTGGAAATTTTGATGCCTTCCCTGTGAGTGTAAGCCTTCTACCAAATTCTTCAAAAGTGATCTCCTTATCTGGCATTCCAACATCAGTGGGGCCAGTTTCAATTCCTGGGTGCATTGCTCATTGTTTTGGTGTTATTACTGAACATCTGTTTAAAGAGGTTGACAATCTGCTTCTTGGGGCCTCACAAGGGCTGGTCCTTTCTGACCCTTTTCGATGCTGTGGATCTCCTAAGCTTAAGAATGTGCCTGTTCCTAGTATTTCTGTAGTACCACCACTTCCATTGTTGATATCACATGTTGTTGGAGGTGATGGTGCCATCATTTTGTATGAAGGCGAAATTCGTGATGTGTGGATACGCCTGGCTAATGCAGGTACTGTTCCAATTGAGCAGGCCCATATTTCCCTGTCAGGGAAAAACCAAGATTCTGTAATTTCATATTCTTCTGAGACTTTAAAATCTTGCCTCCCTTTAAGGCCTGGAGCAGAAGTTACATTCCCTGTGACCTTGAGAGCCTGGCAGGTTGGCTTGGTGGATGCTGATGCTGGTGCAGGGAAGACTGTCTCTGGGAACAATATGAGGCATTCCAAAGATGGAAGCAGCCCATCACTGTTGATCCACTATGCTGGTCCAATGAAAACCTCTGAAGATACTCCAACAAATGGATCTACTGTGCCCCCTGGCAGACGCCTTGTTGTTCCACTGCAGATTTGTGTTTTGCAGGGTTTGTCTTTTGTGAAGGCTCAGCTTCTTTCAATGGAGTTTCCTGCTCATGTCGGTGAAACTCTTCCGAAGTTGGATGACTTAAATAACAAGTCTACTGATGTTGAATCAGAAACAAAAATGGACAGATTGGTGAAAATAGATCCTTTCAGAGGAAGTTGGGGACTGCGATTCCTTGAACTTGAGTTATCTAATCCAACTGATGTCGTGTTTGAAATCAATGTCTCTGTCAAACTGGAGAACTCTAGCAACGAGGACAATCATTTTGCTGATCAGGGTGCTACAGAATATGTCTATCCTAAAACAAGAATTGATAGAGATTGCTCAGCCAGGGTTCTAGTGCCTCTTGAGCATTTTAAATTACCTGTTCTTGATGACTCCTTTTTTATGAAGGACTCACAAGCAGATGGGAATGGCGGAGGAAGAAATGCATCCTTTTCTGAAAAGAACACCAAAGCTGAACTCAATGCTTGTATCAAGAACCTTATATCCAGGATTAAGGTTCAATGGCATTCAGGACGGAATAGCTCTGGAGAGTTAAATATCAAGGAAGCTATCCTGGCAGCTCTCCAAACTTCGGTCATGGATGTTTTACTGCCGGATCCATTGACATTTGGCTTCAGGCTTGTTAGAGATGGTTCTGAATCAGGAAAACCTTATTCTGATAAAGATTCTGAATTAGTTGAATCTCCTGCTTCCAAAGGTTCTGTGATTGCACATGAAATGACACCAATGGAAGTTCTGGTTCGCAATAACACCAAGGATATGATCAAAATGAGTCTTAATATTACATGCAGAGATGTAGCTGGGGAAAATTGTGTAGATGGTACCAAAGCAACTGTTCTATGGACTGGTGTTCTGAGTGATATTACTATGGAAATTCCCCCACTTCAACAAATTAAACACTCTTTCTGCCTACATTTTCTTGTCCCCGGAGAGTATACATTACTTGCTGCAGCAGTGATTGATGATGCAAATGACATTCTTCGAGCTCGTGCAAAGACCACTTCAGCTGCTGAGCCAATTTTCTGTCGTGGACCACCATATCATGTTCGTGTTCTTGGGACTGCCTGA 3597 0.4584 MEPEVSIEGSAMIQVAVVPIGAVPANVLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFAVQPWDSGSLRFKFVLGGAPPSPWEDFQSHRKTLAIVGVVHCPSSPDLEAVVDVFASACKSFPSSLVDRCFAFCPNDTQLEDGSKKGGNLRLFPPADRPTLEFHLNTMMQEIAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELSRLTGDYFWYAGALEGSVCALLIDRMGQKDSVLEDEVRYRYNSVILNYKKSQDNAQRVSPLTFELEATLKLARFLCRRELAKEVVELLTTAADGAKSLIDASDKLILYIEIARLYGSLGYQRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSRSSISDHSLHSKGIVSNNADSGKTYHQSAVSLFESQWSTLQMVVLREILLSAVRAGDPLTAWSAAARLLRSYYPLITPAGQNGLANALSNSAERLPPGTRCADPALPFVRLHSFPLHPTQMDIIKRSTAREDWWAGAAPSGPFIYTPFSKGEPNNIKKQELIWIVGEPVEVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVSVSLLPNSSKVISLSGIPTSVGPVSIPGCIAHCFGVITEHLFKEVDNLLLGASQGLVLSDPFRCCGSPKLKNVPVPSISVVPPLPLLISHVVGGDGAIILYEGEIRDVWIRLANAGTVPIEQAHISLSGKNQDSVISYSSETLKSCLPLRPGAEVTFPVTLRAWQVGLVDADAGAGKTVSGNNMRHSKDGSSPSLLIHYAGPMKTSEDTPTNGSTVPPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVGETLPKLDDLNNKSTDVESETKMDRLVKIDPFRGSWGLRFLELELSNPTDVVFEINVSVKLENSSNEDNHFADQGATEYVYPKTRIDRDCSARVLVPLEHFKLPVLDDSFFMKDSQADGNGGGRNASFSEKNTKAELNACIKNLISRIKVQWHSGRNSSGELNIKEAILAALQTSVMDVLLPDPLTFGFRLVRDGSESGKPYSDKDSELVESPASKGSVIAHEMTPMEVLVRNNTKDMIKMSLNITCRDVAGENCVDGTKATVLWTGVLSDITMEIPPLQQIKHSFCLHFLVPGEYTLLAAAVIDDANDILRARAKTTSAAEPIFCRGPPYHVRVLGTA 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02056 1198 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 272 IPR013935 -
Gma17g02056 1198 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 9 196 IPR013935 -
Gma17g02056 1198 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 742 IPR013935 -
Gma17g02056 1198 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1196 IPR013935 -
Gma17g02056 1198 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02056 Gma-Chr17 37473198 37482400 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02056 K20306 - gmx:100784850 2354.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02056 17 37473198 37482400 Gma14g01054 14 13410489 13435260 GST