Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02024 ATGGGGTGGAGATACAAGGCAGGGTTGTTCCTTATACTTACTGTGGTTGTCATATGGGTCACCTCTGCTGAAGTCACCCAGGATATTTTTGTAGATTACAAGCAGCCATTTGCAGTGACGTATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAGTAGCATTCATTAAGGACTGGTTGTGTAAGTTATTTGAACACCGCTCTTCTAGAAGTGGAAAAAGTGCAAAAGTTGGGGATGAGTTTTCTGTCAGGTGTACCTCTCCTCTGAAGGGCAATGGAGTGCAAAAAAACATTGAAGTAGAATTGGGGGGCATGACTCGAAAAGATAGTGATGCAAACCTTTCAGCACATGAAGAAGTAAAGCCATTGATGGCTAAATATAATGATGCTACTGCTATAAAGGTCGAGAAAGAACATACTACAAGGGAAATTGCTACTTATGGATTTTACATTGCACCTATCTGGTTTATAACAGAGTATCTATCAAATGCTGCCCTTGCGCGAACAAGTGTTGCAAGTACAACAGTATTATCATCTACTTCAGGACTCTTCACTCTCTTCATTGGTGTGCTTATGGGCCAAGACACTTTAAATGTATCAAAAGTAGTTGCTGTCTTGGTCAGCATAGCCGGGGTTGTGATGACAACTCTGGGGAAAACATGGGCTGCAGATGACGCGATATCAAGTGCTTCCAATGGACAACGCTCTCTTGTTGGAGATCTTTTTGGCCTTCTCTCTGCCATGTCATATGGTCTATTTACAGTGCTTCTCAAAAAAATTTCTGGTGAAGAAGGAGAACGAGTTGATGTGCAAAAGTTGTTTGGATATGTTGGATTGTTTACACTTGTAGCACTATGGTGGCTTATTTGGCCATTGTCAGCCTTAGGAATTGAACCGAAGTTTACAATTCCCCATTCAGCCAGAGTGGACGAAGTGGTTCTTGCCAACGGATTTGTTGGTAGTGTTCTCTCAGACTACTTCTGGGCACTTTGTGTTGTATGGACAACTCCCCTTGTGGCCACTTTGGGCATGTCACTTACCATTCCTCTTGCTATGATGGCTGACATGGTGATCCATGGTCGGCATTATTCGGCATTGTACATTCTTGGCTCAATCCAGGTATTTGCAGGCTTTGTGATAGCTAATATTTCAGATAGGCCAACCAAGAAGCAGGGATTATAG 1182 0.4281 MGWRYKAGLFLILTVVVIWVTSAEVTQDIFVDYKQPFAVTYLGASLMVVYLPVAFIKDWLCKLFEHRSSRSGKSAKVGDEFSVRCTSPLKGNGVQKNIEVELGGMTRKDSDANLSAHEEVKPLMAKYNDATAIKVEKEHTTREIATYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGVLMGQDTLNVSKVVAVLVSIAGVVMTTLGKTWAADDAISSASNGQRSLVGDLFGLLSAMSYGLFTVLLKKISGEEGERVDVQKLFGYVGLFTLVALWWLIWPLSALGIEPKFTIPHSARVDEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMMADMVIHGRHYSALYILGSIQVFAGFVIANISDRPTKKQGL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02024 393 Pfam EamA-like transporter family 139 216 IPR000620 GO:0016020|GO:0016021
Gma17g02024 393 PANTHER OSJNBA0070O11.5 PROTEIN 1 392 - -
Gma17g02024 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 279 387 - -
Gma17g02024 393 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 392 - -
Gma17g02024 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02024 Gma-Chr17 36352978 36357252 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02024 K15289 - gmx:100776833 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02024 17 36352978 36357252 Gma14g01069 14 14052988 14057676 GST
Gma17g02024 17 36352978 36357252 Gma04g00604 04 5505644 5510781 PCT
Gma17g02024 17 36352978 36357252 Gma06g00588 06 5314111 5319901 PCT
Gma04g00604 04 5505644 5510781 Gma17g02024 17 36352978 36357252 PCT
Gma06g00588 06 5314111 5319901 Gma17g02024 17 36352978 36357252 PCT