Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01979 ATGGAGAGGATTCACGTCAGCGTTCGTGCAAAGCCTCTCTCCCAGGATGAGGCAAAAACCAGCCCCTGGAGAATCTCCGGCAACTCCATTTCCATTCCTAACCTCTCCAAGTTCGAATTCGATCAAATATTCAGCGAGAATTGTGCCACCGCGCAAGTCTTCGAAGCTCGCACCAAGGATATTGTGGAAGCCGCAGTTCGCGGATTCAACGGAACTGTTTTCGCTTACGGCCAAACTAATAGTGGGAAGACTTACACGATGCGAGGCACGAAAGCGGAGCCTGGAGTCATTCCTCTCGCCGTCCACGATTTGTTTCAAATTATTCAACAAGATGTGGATCGAGAATTTCTTCTTAGAATGTCATACATGGAGATTTATAATGAAGAGATAAATGATTTGTTGGCTCCTGAACATCGAAAACTGCAGATTCATGAAAATCTAGAGCGGGGGATATATGTTGCGGGGTTGCGAGAAGAAATTGTTGCCTCTCCTGAGCAAATCCTTGATCTCATGGAGTTTGGAGAATCTCATAGACATATTGGAGAGACAAATATGAATGTGTACAGTAGTAGGTCCCATACTATTTTCCGCATGATAATTGAGAGTAGGGATAGAAGTGAAGATGGAGGAAGTGGCAGCTCTTGTGATGCTGTCCGTGTATCGGTGTTGAATTTAGTGGATCTTGCTGGTTCAGAGCGTGCTGCAAAAACTGGAGCAGAAGGTGTCCGACTCAAAGAAGGTTCTCACATAAACAAGAGCTTAATGACTTTGGGAACTGTGATTAAAAAATTGAGTGAAGGTGCTGAGAGTCAAGGGAGTCATGTTCCATATCGAGATAGCAAGCTGACTCGAATTTTGCAACCTTCTCTCGGAGGAAATGCCAGAACAGCTATAATATGTAATATCACACTTGCACAGATACATACAGATGAAACTAAAAGCAGCCTTCAATTTGCAAGTAGAGCACTTCGTGTCACAAATTGTGCTCAAGTGAATGAGATTTTGACAGATGCTGCTTTATTAAAGCGCCAAAAGAAAGAGATTGAAGATCTTCGTGCCAAATTGATGGGTTCTCATTCAGAGCATTTGGAACAGGAGATTCTGAACCTTCGAAATACATTATTACAGACTGAACTGGAAAGGGAACGCATAGCTTTGGAATTAGAGGAGGAAAAGAAAGCTCAAGTTGAATGGGAAAAAAGAGTACAGGAACAAGCCAAGAAAATCGAAAATTTGAGTTCAATGGTTTTGTTTTCAAACAGGGATGAAAGTCGTGAGCATATTAAAAAGGACAAGAGGCGGGATACATGGTGTATAGGAAATCTTTCAGGGGAGCATCTCAGAAATGTATACCCTGGCATCCAACCTAGTGCTTCTACTATAAAACCCATAAGACCTAAACGAGACATGGGACCACTTCTTCCTTTTGAGGAACTTGTAAATGAAGATGTTTCTGTGGATGAGCCCTTCAAGCAAGAAGAAGATAATAAAGATGATACTAACAAGGATTGTAATCTACCAAACCCCTGTGCTTTATTGCATGTAACAAACAGGAAAAAGGCACCATCGCTGAAGAAAAGCTTGTCCATGGTTTGTGATGAGGAGGACAACAAATTTCTAGAATTGCAGGCAGAATATGAGAGTTTGTTTCTAAAATTTGAAACTCAGAGAACTATAAGTGAGATACAGATTGAATCATTGAGAAAACAGCTAATTGAGGAAACTTCTCTTCAATGCCTTCATTCTAAGGAATCTATCGACTCTTTAAATTATGCTCATAGTGGTAGCTTGAATGCTGATAAAAATGTGAATTTTAGAGAGTCAGATGCTATTCTTGTTATCAAGAGACTTCAAGATCAGATTAAGGTTTTGGAAATGGAAAACTTGTCAAGCCAAAAAAGCTTGGATAATGTTGTTGGTCTGGCAACAAAGCAGAACATATGTGCTAGGGAGAAATATGAAGAGCTCTATGAAGAGCTTATAAGTGCACAGGAGACAGCTCGACTGGCTAATGAACAACTTACTTCCACTGAAACTGCGAGCAACATTAATGATGGAAATTTTGACTTTGTGATCAGTGTTTCCATGGGAATTGAAGAAATTGTGTCTGAAATTCAAAACTCAAAAGATGCTGTTCAAAGTGTTATGTTTATGGTGGATGACGCTATTACAAATTTCTCTGCTCTCTATGATATGCTCCTTGTTTTGAAAACCTCAGTATCTCAGGATTCTGCAGAACAAAGTTTAGTCTTGAGTAATTATCAGAAGTTGAATTCTTGCTTGAGAAAAAAAATATTTGAGCTTGAGAATGAAAAGATTCTTCTGGACAACCAATTGGCTGATCTTCAGAAGCATCTTCAGGAGTCAAAACTAGATTCTCAGAATTCCCAAAATTCTTTGATGGAAAACTTAGAACAGCATAAATTTGAAAATGCAGAGTTGATTTCTTATATTCAAACTCTTGAAAAGGATTTATCATGTTTGACATCGTCTTCAGTGACCAAGGATAGGGAAACTTTAAGAAAAGATCTGGAGAAGACAAAATCCAAGTTGAAAGAAACTGAGTCTAAGCTTAAGATTACCATACAAGAGAAAACAAAACTTGAGGGTGAGAAAGCCTATGCTGAACGAGAGATTAAACGGTTGCACGGTCAAAACTCTCTTCTTGAACGTGATATCAATAAACGTGATTCACTTGCAGGAAGAAGACGTGATTCAATTGTTGAAAGGGGTTCAAAGATGTTTGATCCTAAAAGACCAAAGGGTCTGGCAATTTCTCTGGAACAAACATTACAGGAAGAGCACAAAAAGCTGGAAGTTTTTGCATTTGAATCAGAAGCAAAAATTGCTTCGTTGGAAGAAAAAATTGCAGCTATGTTGATGGAGAAAGAAGAGGTGATATCTATTAATGAAGGTTTGATGTCAGAACTCGAAGGCTTGACTGAAAAACTGAATACATCAACCTCTGAACTATATAATTTGATGGAGGAAATTTCAGCTCTTAAACAAAGATTGGAAGAATCTGATATCAACCAAGAAAAATTGAAAAGCTCTGTTGAAGTACTGATGGAAGAAAAGGAGGAGTTGGCTATGCAACTCACTGATTCCCTTTTGGAAATAGAGGAGGAAAGGGCAATATGGTCTGCCAAAGAGAAAGATGCACTTCTAGCCATAGAAGAACAAGCAAAGTCAAACAATGTGCAAATTACATCATTATCAACAAAATTATTAGAAGTGAGGAATGAATTGGAATCTTGTAGAGAAGAATGCAAGACCCTACGTGAAAGATTGACTATTACATATGAAAATGCACATATCAAGGAAAATTCCAG 3332 0.3884 MERIHVSVRAKPLSQDEAKTSPWRISGNSISIPNLSKFEFDQIFSENCATAQVFEARTKDIVEAAVRGFNGTVFAYGQTNSGKTYTMRGTKAEPGVIPLAVHDLFQIIQQDVDREFLLRMSYMEIYNEEINDLLAPEHRKLQIHENLERGIYVAGLREEIVASPEQILDLMEFGESHRHIGETNMNVYSSRSHTIFRMIIESRDRSEDGGSGSSCDAVRVSVLNLVDLAGSERAAKTGAEGVRLKEGSHINKSLMTLGTVIKKLSEGAESQGSHVPYRDSKLTRILQPSLGGNARTAIICNITLAQIHTDETKSSLQFASRALRVTNCAQVNEILTDAALLKRQKKEIEDLRAKLMGSHSEHLEQEILNLRNTLLQTELERERIALELEEEKKAQVEWEKRVQEQAKKIENLSSMVLFSNRDESREHIKKDKRRDTWCIGNLSGEHLRNVYPGIQPSASTIKPIRPKRDMGPLLPFEELVNEDVSVDEPFKQEEDNKDDTNKDCNLPNPCALLHVTNRKKAPSLKKSLSMVCDEEDNKFLELQAEYESLFLKFETQRTISEIQIESLRKQLIEETSLQCLHSKESIDSLNYAHSGSLNADKNVNFRESDAILVIKRLQDQIKVLEMENLSSQKSLDNVVGLATKQNICAREKYEELYEELISAQETARLANEQLTSTETASNINDGNFDFVISVSMGIEEIVSEIQNSKDAVQSVMFMVDDAITNFSALYDMLLVLKTSVSQDSAEQSLVLSNYQKLNSCLRKKIFELENEKILLDNQLADLQKHLQESKLDSQNSQNSLMENLEQHKFENAELISYIQTLEKDLSCLTSSSVTKDRETLRKDLEKTKSKLKETESKLKITIQEKTKLEGEKAYAEREIKRLHGQNSLLERDINKRDSLAGRRRDSIVERGSKMFDPKRPKGLAISLEQTLQEEHKKLEVFAFESEAKIASLEEKIAAMLMEKEEVISINEGLMSELEGLTEKLNTSTSELYNLMEEISALKQRLEESDINQEKLKSSVEVLMEEKEELAMQLTDSLLEIEEERAIWSAKEKDALLAIEEQAKSNNVQITSLSTKLLEVRNELESCREECKTLRERLTITYENAHIKENS 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01979 1110 PANTHER CENTROMERE PROTEIN E 1 1053 - -
Gma17g01979 1110 Coils Coil 331 408 - -
Gma17g01979 1110 MobiDBLite consensus disorder prediction 1 20 - -
Gma17g01979 1110 Coils Coil 653 673 - -
Gma17g01979 1110 Pfam Kinesin motor domain 35 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01979 1110 PRINTS Kinesin heavy chain signature 68 89 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01979 1110 PRINTS Kinesin heavy chain signature 183 200 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01979 1110 PRINTS Kinesin heavy chain signature 222 240 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01979 1110 PRINTS Kinesin heavy chain signature 275 296 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01979 1110 ProSiteProfiles Kinesin motor domain profile. 3 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01979 1110 Coils Coil 1069 1096 - -
Gma17g01979 1110 Gene3D Kinesin motor domain 1 356 IPR036961 -
Gma17g01979 1110 Coils Coil 751 788 - -
Gma17g01979 1110 Coils Coil 614 634 - -
Gma17g01979 1110 PANTHER KINESIN-LIKE PROTEIN KIN-7O 1 1053 - -
Gma17g01979 1110 SMART kinesin_4 1 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01979 1110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 356 IPR027417 -
Gma17g01979 1110 Coils Coil 837 885 - -
Gma17g01979 1110 Coils Coil 970 1043 - -
Gma17g01979 1110 ProSitePatterns Kinesin motor domain signature. 221 232 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma17g01979 1110 CDD KISc_CENP_E 4 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01979 Gma-Chr17 35374023 35403953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01979 4 355 Miscellaneous Gene Families AT4G39050 47.486 7.89e-98 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01979 K11498 - gmx:100813718 2065.04