Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01977 ATGAAGGGAAGGTTCATGTTTCTGTCGGTGCTCCTTTGTGCCACTTTTCATGTCTCCTTCTCTATTATCGACGGTTTAGTTGCCAACGGCAACTTTGAGTTGGGTCCAAAGCCCTCCGCCCTAAAAGGAACAGTGGTGGTGGGCGGGAGCCACTCGATCCCAGAATGGGAGATCTCCGGCTTTGTGGAGTACATAAAATCCGGCCAAAAGCAAGGGGACATGTTGCTCGTCGTCCCAGAGGGTGCCTACGCGGTGCGCCTAGGGAACGAGGCCTCCATCAAGCAGAGAATCAAGGTGATCAAGGGCATGTACTACTCCATCACCTTCATGGTGGCTCGCACGTGTGCACAAGAGGAGAGGCTCAACATTTCCGTCACTCCTGATTGGGGTGTGATTCCTATTCAGACTTTGTACACGAGCAGTGGTTGGGATCCCATTGCGTTCGGGTTTAAGGCAGAGAGTGAAACGGTGGAGATGCTGATTCATAACCCTGGAAAAGAGGAGGATCCCGCGTGTGGCCCGCTTGTTGATTCCGTTGCTCTCAGGACTCTCTACCCTCCCAAAGCTACTAACCAGAATATACTAAAGAATGGTGGATTTGAAGAAGGACCCTATGTGTTTCCCAACTCATCTTGGGGAGTGATCATCCCCCCAAACATTGAGGATGACCACTCTCCCCTCCCAGGGTGGATGGTTGAGTCCCTAAAGGCAGTGAAGTACATAGACTCAGACCACTTCTCAGTCCCTCAAGGCAAGAGAGCAGTGGAGCTAATAGCAGGCAAAGAGAGTGCCATTGCTCAAGTTGCCAGAACCATCCCTGGCAAAACCTATGTTCTCTCATTCTCTGTTGGGGATGCTAGCAACTCCTGTGAAGGGTCCATGATTGTGGAAGCCTTTGCAGGCAAAGACACCATCAAGGTGCCCTATGAGTCCAAAGGCAATGGAGGGTTCAAGCGTGCTGCACTCAAGTTTGTGGCGGTTACCCCTAGAACAAGAGTCATGTTCCTTAGCACATTCTACACCATGAGAAGTGATGACTTCTCTTCACTCTGTGGGCCTGTGATTGATGATGTCAAGTTGGTGAGCCTGCGTAAACCATGA 1101 0.5095 MKGRFMFLSVLLCATFHVSFSIIDGLVANGNFELGPKPSALKGTVVVGGSHSIPEWEISGFVEYIKSGQKQGDMLLVVPEGAYAVRLGNEASIKQRIKVIKGMYYSITFMVARTCAQEERLNISVTPDWGVIPIQTLYTSSGWDPIAFGFKAESETVEMLIHNPGKEEDPACGPLVDSVALRTLYPPKATNQNILKNGGFEEGPYVFPNSSWGVIIPPNIEDDHSPLPGWMVESLKAVKYIDSDHFSVPQGKRAVELIAGKESAIAQVARTIPGKTYVLSFSVGDASNSCEGSMIVEAFAGKDTIKVPYESKGNGGFKRAALKFVAVTPRTRVMFLSTFYTMRSDDFSSLCGPVIDDVKLVSLRKP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01977 366 PANTHER PLANT/F18G18-200 PROTEIN 6 366 - -
Gma17g01977 366 Gene3D - 188 362 - -
Gma17g01977 366 PANTHER OS02G0527500 PROTEIN-RELATED 6 366 - -
Gma17g01977 366 Pfam Protein of unknown function (DUF642) 194 360 IPR006946 -
Gma17g01977 366 Pfam Protein of unknown function (DUF642) 25 182 IPR006946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01977 Gma-Chr17 35321969 35328227 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01977 - - gmx:100813910 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01977 17 35321969 35328227 Gma17g01977 17 35321969 35328227 ECH
Gma14g01115 14 16263228 16269366 Gma17g01977 17 35321969 35328227 ECH
Gma17g01977 17 35321969 35328227 Gma14g01115 14 16263228 16269366 GST