Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01960 ATGGCCTTGGAAGTAACTCATATATGCAAAAGAACTGTGGTGAGCACCAAGGCAGTGGAGCCAGGAAAGTACTTCCCCTTGTCTGTTTTGGATCGCTACATGGAGAACAACCACATTAGGATGGTGTACTATTACCAAACCTCAAGAGAAGTGGAACTTGGAAAAGTGACCAAGAAGTTGAGAGAGACCTTGTCAGAGATGCTTACCCATTTTCCCATAGTGAGTGGAAGGTTGGTAAGAGATGATGAGACAGGGCATTGGAAGATCAAGTGCAATGATGCTGGAGTTAGAGTGGTGGAGGCCAAAGCCAAAGGGAGTGTAGGAGGGTGGCTAGCTAACCTTGATAGGGAAAAGGAACTCCAACTTGTGCATTGGGAGGACATGTTTCACAAGCCCTATTATTGGTCCACCTTTTATGTCCAGCTAACTGAATTCGAAGAAGGTGGATTAGCAATTGGCCTAAGCTGCTTTCATCTCTTGGTAGATTCCACTTGTGCAACATTATTCATGAAAGCCTGGGCTGACATTTCAATGGTAAACAAAATGATTACTCCTCCATTATTCCATCATTTACCTCCTCGAAGGCCACCAAATAGAAACCCCAATCATCACCTCCACATGGAGTTAATTCATCACTACAAATCCCTAATTGAAAAACCCAATTCTACAAAAGAAACAATGTACACTACAATTTCAATGGGCTTCTCAAACCCCATGGTTCAGGCCTGCATGTCCATGGCCCAACCTAATGGCCCAATACCGCCCTTTGAGGCTTTAGCAGCATTATTTTGGGTCTCTTTGAGCAAAGTGAAGGGTCTGAGAAATAGGCTTGTTGACATGTCCATATGTTTGGACATGAGAAAAGTGTTGGGCCTAGATTGTACATTCTTTGGGAACTGCATGGTGTATAATAAGGTCAATGTAGAAGGGAACAATTACAAATTTCCGCAAGTTGTTAGGGCAATAAGTGATGTTGTGGCTAAAATGGACACTGAGGCAATTATCAATTTGACCGAGTGGCTAGAAAATAATGATGTGAATTCACCTACCATGATGAACAATCATAATTTGGTTTGTACTAGTTTAGAGGGTATGGACCCTTATTTAACCGTGTTTCCAGATTTGTTCAAACCCATCCATGTTTCTTATTACATAGAACCAGTTGTGGGAGAAGGACAAGTTTTGATTCTGCCTGGTCTTCCAGAGGAGGGTCCTTTAAGTAGGGTGGCCATGGTGACCCTTAGGAAAGAAGAAGCAATTAAGCTTTGTGAAGATGATCTTATTTCACAATTCTCTCCCACTATATTGATGAAATGTGAATGA 1323 0.421 MALEVTHICKRTVVSTKAVEPGKYFPLSVLDRYMENNHIRMVYYYQTSREVELGKVTKKLRETLSEMLTHFPIVSGRLVRDDETGHWKIKCNDAGVRVVEAKAKGSVGGWLANLDREKELQLVHWEDMFHKPYYWSTFYVQLTEFEEGGLAIGLSCFHLLVDSTCATLFMKAWADISMVNKMITPPLFHHLPPRRPPNRNPNHHLHMELIHHYKSLIEKPNSTKETMYTTISMGFSNPMVQACMSMAQPNGPIPPFEALAALFWVSLSKVKGLRNRLVDMSICLDMRKVLGLDCTFFGNCMVYNKVNVEGNNYKFPQVVRAISDVVAKMDTEAIINLTEWLENNDVNSPTMMNNHNLVCTSLEGMDPYLTVFPDLFKPIHVSYYIEPVVGEGQVLILPGLPEEGPLSRVAMVTLRKEEAIKLCEDDLISQFSPTILMKCE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01960 440 Gene3D - 1 207 IPR023213 -
Gma17g01960 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 438 - -
Gma17g01960 440 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 438 - -
Gma17g01960 440 Pfam Transferase family 4 399 - -
Gma17g01960 440 Gene3D - 210 424 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01960 Gma-Chr17 35040742 35042934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01960 5 425 Acyl Lipid Metabolism Gene Families AT4G24510 26.047 9.86e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01960 - - gmx:100804090 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01960 17 35040742 35042934 Gma17g01960 17 35040742 35042934 ECH