Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01943 ATGGCTTCCATGAGTATATTCACCACCATTTCCCTCGCCGCCGACGCCCGGAATCCGGCCATCTATTTTCCCCGGCGGCGGCAGCCCAACACGGTCATTTTCGCCGCCGCCTCATCGCCGGAATCTCCTCCAGAAATAGAGCTCGAGTTCATCGGGCCAAAACCGGGAAGTGATGGATCGTACCCGGTGGAGAGAGTGAAAGCAATAAGCGGAGAGAAGCTGTTGAGGAACATCATGTTGGATAACAAGATCGAGCTTTATGCCACCTATGGGAAGCTGATGAACTGCGCGGGAGGTGGTAGCTGCGGAACATGCATAGTAGAGATTATTGAAGGAAAGGATCTTTTAAATGAAAGAACAAACACTGAACTCAGATATCTTAGTAAGAAACCCGAATCTTGGAGGCTGGCTTGTCAAACTATTGTTGGAAACAAAGAAAACTCTGGCAAGGTTGCTGTTCAAAGGATTCCTCAGTGGAAGAAGTAG 486 0.4918 MASMSIFTTISLAADARNPAIYFPRRRQPNTVIFAAASSPESPPEIELEFIGPKPGSDGSYPVERVKAISGEKLLRNIMLDNKIELYATYGKLMNCAGGGSCGTCIVEIIEGKDLLNERTNTELRYLSKKPESWRLACQTIVGNKENSGKVAVQRIPQWKK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01943 161 CDD fer2 55 142 IPR001041 GO:0051536
Gma17g01943 161 Gene3D - 59 160 IPR012675 -
Gma17g01943 161 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 3, CHLOROPLASTIC 36 160 - -
Gma17g01943 161 SUPERFAMILY 2Fe-2S ferredoxin-like 65 144 IPR036010 GO:0051536
Gma17g01943 161 PANTHER FERREDOXIN/ADRENODOXIN 36 160 IPR001055 GO:0051537|GO:0140647
Gma17g01943 161 Pfam 2Fe-2S iron-sulfur cluster binding domain 93 142 IPR001041 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01943 Gma-Chr17 34518642 34522189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01943 - - gmx:100807125 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01943 17 34518642 34522189 Gma14g01336 14 27078635 27079337 GST