Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01919 ATGAAGCTTAAAAGGTGGCTCGGGAGTGTTTTGTTCCTCATTGTTGCCACAGTGAGCAATGCCGCAGGTGCATTTGTGGGGGTAAACATTGGCACTGATGTTACTGATCTTCCATCAGCTTCAAACGTTGTTGCTATTCTGAAATCACATCAAATTACACACGTGCGTCTCTATAATGCCAATGGGCACATGCTACAAGCCCTTTCAAACACTGGCATTGAAGTGATTGTTGGTGTCACAGATGAAGAGATACTAGGCATTGGAGAATCTGCATCAGTTGCTGCAGCATGGATCAGTAAGAATGTGGCAGCATACATGCCATCCACTAATATCACAGCAATATCAGTTGGCAGTGAGGTTCTCACCTCAGTCCCAAATGTTGCACCTGTTCTTGTTCCTGCCATGAACCATCTTCACACAGCACTTGTTGCTTCAAACCTTAACTTCCGTGTTAAGGTTTCAACGCCGCAGTCCATGGATGTAATCTCTAGGCCTTTTCCTCCTTCCACAGCCACCTTTAACTCCTCATGGAACTCCACAATCTACCAACTCCTTCAGTTTTTGAAGAACACAAATTCCTCTTACATGTTAAATGCTTACCCTTATTATGGATACACCAAAGGAGATGGAATTTTCCCAATTGAATATGCTCTATTCAGACCCCTTTCTCCAGTGAAGCAAATTGTTGACCCAAACACACTATTCCACTACAACAGCATGTTTGAGGCTATGGTGGATGCTACCTATTATGCCATAGAAGCCTTCAATTTCAATAATATACCTATTGTTGTCACAGAAACTGGTTGGCCAAGTTTTGGTGGAGCAAATGAACCAGATGCTACTACAAAGAATTCTGAGACCTACAATAATAATTTGATTAAGAGAGTAATAAATGGTTCAGGTCCCCCTAGTCAGCCAAAGATAGCCATCAATACCTACCTATATGAATTATTCAATGAAGATAAGAGGAAAGGTCCTATATCAGAAAGGAATTGGGGTGTTTTTTATGCTAATGGAAGTAGTGTTTATTCCTTGAGTTTTAGTGCTTCCAACATGAGTAATGCAAATTCTCAAGGATCATTTTGTGTGGCTAAAGATGATGCAGACACTGATAAATTGCAAGCTGGATTGAGCTGGGCTTGTGGACAAGGCCAAGCTAACTGTATAGCTATTCAACCAGGGAGACCTTGCTATTCCCCCAATAATGTGAAGAACCATGCCTCTTATGCTTATAATGATTATTATCAAAAGATGCATAATGCTGGTGGAACATGTGACTTTGATGGTACAGCTACAACAACTACTGAGGATCCTAGTTATGGATCTTGTATATACGCTGGAAGTGCTAACACAAGAAATGGTGGAAGAAGTTCATCTTCTACAGCACTTGGACTTGGACCTGTAAGTCCAGTTGGAGCTGGTTTGAACCTGCAAGTGTCCACACTTCAGTATTTGATATCGTTTATTAGTGTATTTTTCTCTCTGTTGTTGTCATGA 1497 0.4108 MKLKRWLGSVLFLIVATVSNAAGAFVGVNIGTDVTDLPSASNVVAILKSHQITHVRLYNANGHMLQALSNTGIEVIVGVTDEEILGIGESASVAAAWISKNVAAYMPSTNITAISVGSEVLTSVPNVAPVLVPAMNHLHTALVASNLNFRVKVSTPQSMDVISRPFPPSTATFNSSWNSTIYQLLQFLKNTNSSYMLNAYPYYGYTKGDGIFPIEYALFRPLSPVKQIVDPNTLFHYNSMFEAMVDATYYAIEAFNFNNIPIVVTETGWPSFGGANEPDATTKNSETYNNNLIKRVINGSGPPSQPKIAINTYLYELFNEDKRKGPISERNWGVFYANGSSVYSLSFSASNMSNANSQGSFCVAKDDADTDKLQAGLSWACGQGQANCIAIQPGRPCYSPNNVKNHASYAYNDYYQKMHNAGGTCDFDGTATTTTEDPSYGSCIYAGSANTRNGGRSSSSTALGLGPVSPVGAGLNLQVSTLQYLISFISVFFSLLLS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01919 498 Gene3D Glycosidases 25 353 - -
Gma17g01919 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 475 IPR044965 GO:0004553|GO:0005975
Gma17g01919 498 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Gma17g01919 498 PANTHER O-GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 2 475 - -
Gma17g01919 498 SMART X8_cls 360 445 IPR012946 -
Gma17g01919 498 Pfam X8 domain 361 432 IPR012946 -
Gma17g01919 498 Gene3D - 354 454 - -
Gma17g01919 498 SUPERFAMILY (Trans)glycosidases 26 347 IPR017853 -
Gma17g01919 498 Pfam Glycosyl hydrolases family 17 26 347 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01919 Gma-Chr17 33497292 33500478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01919 1 479 Glycoside Hydrolase AT3G13560 65.145 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01919 K19892 - gmx:100779131 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01919 17 33497292 33500478 Gma14g01162 14 18496306 18499637 GST