Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01915 ATGCTGAGGAAGAGGACCAGGTCAATCCAGAAAGATCAACACCACACTGGTCAAATGGCAATCTCTGATACCAATTCTGAGTCTCATGCTTTGGGGAGCAATGGCAAAAGCAACTCAATTTTCAATTCCCCTCTTCTGTTTGTGGGCATGGGTCATAAGGGCTTGTTGGATTCTGATTCAGTTAAGAGCCCCACTTCACCATTAGATTTTGGTTTCCTTTCAAACCTAAGCAACCCCTTTAGAACCCCAAGTTCATTGTCCAATGAGGGACAACATAGGAGTTGGAACTGTGCCAAAGTAGGTCTAAGTATTATAGATTCTTTGGAAGAATGTTCTAAGTTTTCTGGGAAAATTCTCCAGGCTTCAGAGAGCAAGAAGACTAGTCTTTGTCCTCCAATGATTACTAAAGCCCCAAAATGTAAATCCTATATGGATTCTGCTCAGGCATCTAAATCTTTACCTAAAGATTTTTGTAAGATTACTTGTACTCAAAATGGTTCTATTTTCCCTAAGGGTGAGTCCACTGTTCTTTCTGAGATTGGAGAGGCCCCTCTAGAATATGAGTCCTTTGGGAAAACTGTGTCTTTTTCATTGGACTCTTGCAGTCCAATTAGAAATCTGTCTGGTTTAACTGGTTCCGACTTTGATTCTGACTCTGAGAATTTTGCATTGAAACAGATGTGCTCCCCTCCTCATTTTATTGGAGGAAGCCAAAATAACACAAAATTTTTGCTACCTTCTGAGGTACATTCAAACCCTGTAGCTGCAGTCTCTTCTAATGAATTTATCGAGTCTCTATCGGCTAGTGAGATTGAACTCTCTGAGGATTACACCTGTGTGATTTCCCATGGTTCTAATCCAAAAACAACCCATATTTTCTGTGACTGCATTTTGGAAAGTCATGTTAATGATTCTGAAAGACATTATAAGGCTGAAGAGGAGGGAACGGGATTGCCCCTTTTCAGTGTTAACATTTTGCATACTCCAAGCCAATATCCTTCTCATGACTTCTTAAGTGTCTGTCACCATTGCAACAAGAAGTTGGAAGATGGGAAAGATATTTACATATATAGAGGTGAAAAATCATTTTGCAGTTTGAGCTGCCGCGAAATAGAGATCACGAACGATGAGGAGCAAGAGAAATCCAATTCATCACCTGAAAACTCTCCAAAGTGGGGACTTGGAGGGAAATTTTTTTAA 1200 0.4017 MLRKRTRSIQKDQHHTGQMAISDTNSESHALGSNGKSNSIFNSPLLFVGMGHKGLLDSDSVKSPTSPLDFGFLSNLSNPFRTPSSLSNEGQHRSWNCAKVGLSIIDSLEECSKFSGKILQASESKKTSLCPPMITKAPKCKSYMDSAQASKSLPKDFCKITCTQNGSIFPKGESTVLSEIGEAPLEYESFGKTVSFSLDSCSPIRNLSGLTGSDFDSDSENFALKQMCSPPHFIGGSQNNTKFLLPSEVHSNPVAAVSSNEFIESLSASEIELSEDYTCVISHGSNPKTTHIFCDCILESHVNDSERHYKAEEEGTGLPLFSVNILHTPSQYPSHDFLSVCHHCNKKLEDGKDIYIYRGEKSFCSLSCREIEITNDEEQEKSNSSPENSPKWGLGGKFF 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01915 399 PANTHER DUF581 FAMILY PROTEIN 1 399 - -
Gma17g01915 399 Pfam zinc-finger of the FCS-type, C2-C2 330 378 IPR007650 -
Gma17g01915 399 MobiDBLite consensus disorder prediction 376 399 - -
Gma17g01915 399 MobiDBLite consensus disorder prediction 13 34 - -
Gma17g01915 399 ProSiteProfiles Zinc finger FLZ-type profile. 336 380 IPR007650 -
Gma17g01915 399 PANTHER FCS-LIKE ZINC FINGER 11 1 399 IPR044585 -
Gma17g01915 399 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01915 Gma-Chr17 33472210 33473933 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01915 - - gmx:100804101 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01915 17 33472210 33473933 Gma14g01170 14 18655356 18657835 GST
Gma17g01915 17 33472210 33473933 Gma04g00668 04 6195515 6197788 PCT
Gma17g01915 17 33472210 33473933 Gma06g00662 06 5989269 5991643 PCT
Gma04g00668 04 6195515 6197788 Gma17g01915 17 33472210 33473933 PCT
Gma06g00662 06 5989269 5991643 Gma17g01915 17 33472210 33473933 PCT