Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01907 ATGGATTTCAAAAACTCTTCTCTTCTATGCCTAGCTCTTTTCCTTGCATGCTCTTCGGCTATTCGTGCATTTGACATCACACAATTGCTAGGTCAATATCCAGAGTTTTCCACATTCAACAAATACCTAACCGAAACCAAGCTTGCAGACCAAATAAACAGCCGCAACACCATCACTGTCCTCGCCGTTGAAGACTCAGCCATGCATTCCATTGCTGCCAAGTCCCCAGAAGCCATTAAGGCCATCATTGGCACCCATGTCATCCTTGACTTCTTTGATGAGAAGAAGCTCATGGAAGCTCAAGCTAGTAGCCAACAGTTGACAACCCTATTCCAGGCTTCAGGCCTTGCTGTGAACCAACAAGGCTTCCTCAAGGTTGCACTTGTTGGTGAAGGCGAGATCGCCTTCGGGTCGGCTGCGAGCGATGCCCCAGCCGACGCCACCGAGCTCGTCAGGACCGTCACCAGTGAGCCCTACAATATCTCCATTCTCCAAGTCACCAAGCCTATCCTAGCCCCAGGTGTTGATTCACCAACCCCAGCCTCATCATCTGGTGCCCAACCCTCACAAGGAGCCAAGGCCCCCATTGCAGCACAAAGTGCCAAGGCACCAGTTACTGCACAAGAGGCTAAAACTCCTATGCCATCATCACAAGGTGTCAATGCGAAGGCACCCGTTCAGGCACAGGTTGCAAAGTCTCCTGTGCCAGCTCAGAGTGCCAAGGCACCAACTCCTTTGGAGAATGCGGCCTCGCCTTCACCTGCTAGTGAAAGCGTTGCCGAGTCTCCAGAGGTTGCTGCTGAAGCCCCAGCAACAAGCCCAGTTGGGGCTGAGGCTCCAGGTCCCTTGGCTGATGATGTTGCTCCGGCAGATGTTACTGCTAGCAGTGCTTCGACCACGAAGATGGGTTTGGTTGGGGCAGTGATGGCCTTTGCTTCCCTCTTCATTGTTCTGTAA 957 0.5256 MDFKNSSLLCLALFLACSSAIRAFDITQLLGQYPEFSTFNKYLTETKLADQINSRNTITVLAVEDSAMHSIAAKSPEAIKAIIGTHVILDFFDEKKLMEAQASSQQLTTLFQASGLAVNQQGFLKVALVGEGEIAFGSAASDAPADATELVRTVTSEPYNISILQVTKPILAPGVDSPTPASSSGAQPSQGAKAPIAAQSAKAPVTAQEAKTPMPSSQGVNAKAPVQAQVAKSPVPAQSAKAPTPLENAASPSPASESVAESPEVAAEAPATSPVGAEAPGPLADDVAPADVTASSASTTKMGLVGAVMAFASLFIVL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01907 318 MobiDBLite consensus disorder prediction 174 287 - -
Gma17g01907 318 MobiDBLite consensus disorder prediction 210 224 - -
Gma17g01907 318 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 315 - -
Gma17g01907 318 MobiDBLite consensus disorder prediction 244 258 - -
Gma17g01907 318 MobiDBLite consensus disorder prediction 177 194 - -
Gma17g01907 318 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 315 IPR033254 -
Gma17g01907 318 Gene3D FAS1 domain 23 162 IPR036378 -
Gma17g01907 318 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Gma17g01907 318 SUPERFAMILY FAS1 domain 30 120 IPR036378 -
Gma17g01907 318 ProSiteProfiles FAS1/BIgH3 domain profile. 23 155 IPR000782 -
Gma17g01907 318 Pfam Fasciclin domain 34 121 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01907 Gma-Chr17 33303377 33304333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01907 - - gmx:100819218 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01907 17 33303377 33304333 Gma17g01907 17 33303377 33304333 ECH