Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01902 ATGGGTACTGCAATCCAACTCTGCGTCACTTCAAATCCTGCTCAAGGTAGAAAATGCAAGTACGAAGGTCAATCAGTGAGAGCACTTCCTATACGTATATTGTCAGTGGGGAAGAAGCGATCACGTGGACTGCAACTCATGGTTGATGAGTATGCTGATAAGCTCAGGTACTATTGCAATGTTGAGGATGCTCAAATACGGCCAAATCCTCGAAATGCACGTGACCAAAGGGCTCAGGTTGATGCCGAAGATGAGGCAGTGATGAACCTTATAAGGTCTGATGATTGGGTTGTGATGTTGGATGAACGTGGGCAAGACATTGAATCTGAGCAAATGGCAGAGTTGGTGGGTGATGCAGGAAATACTGGTGCTTCACGATTATCCTTCTGTATTGGTGGGCCCTATGGTCATGGAAGAAAAATGCGGCAACGAGCTAACTTATCAATCAAGTTATCTTCACTGGTCTTGAATCATCAAATAGCATTACTTGTGCTCATGGAACAGCTTTACAGGTCGTGGACAATTTTAAAAGGACAAAAGTATCATCATTAG 552 0.4384 MGTAIQLCVTSNPAQGRKCKYEGQSVRALPIRILSVGKKRSRGLQLMVDEYADKLRYYCNVEDAQIRPNPRNARDQRAQVDAEDEAVMNLIRSDDWVVMLDERGQDIESEQMAELVGDAGNTGASRLSFCIGGPYGHGRKMRQRANLSIKLSSLVLNHQIALLVLMEQLYRSWTILKGQKYHH 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01902 183 SUPERFAMILY alpha/beta knot 30 181 IPR029028 -
Gma17g01902 183 Gene3D - 28 183 IPR029026 -
Gma17g01902 183 PIRSF MT_bac 29 183 IPR003742 GO:0006364|GO:0008168
Gma17g01902 183 SFLD SPOUT Methyltransferase 13 183 - -
Gma17g01902 183 PANTHER METHYLTRANSFERASE 6 183 IPR003742 GO:0006364|GO:0008168
Gma17g01902 183 CDD RlmH-like 31 183 IPR003742 GO:0006364|GO:0008168
Gma17g01902 183 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 29 183 IPR003742 GO:0006364|GO:0008168
Gma17g01902 183 Pfam Predicted SPOUT methyltransferase 31 182 IPR003742 GO:0006364|GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01902 Gma-Chr17 33150462 33155174 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01902 K00783 - gmx:100817089 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01902 17 33150462 33155174 Gma17g01902 17 33150462 33155174 ECH