Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01893 ATGGCTGAAGAATTTGTGAAGGGCTCTGTTCATCAAAACGGCGTTGCTCTTATAACCCTCGATCGCCTCAAAGAGGTAAATGTTTTTTGCTTTGTTTGTGGTTTTCCCTCTTATGAGCTGATCCACGAAAGAGCATCCACGAGGCAAGTTTACGAATGTTCGAGAAAGATTCAGGACTTCTTCACGAGGCCATCAGGGATGCAAAAACGCAATGATTTGACTTCTCAATATAATGCTGGTGGATATATACCTCAGCAAGATGGAGCTGGGGATGCTGCACATGGAGTTTTTGAAATTGAGGATTTTGGTGGCTGTTTTGACAGAACTGATTCACACACAACTATGATTGATGGCCTTGGTGTTGCTGGATGGGGAGTTGGTGGAATAGAAGCTGCAATGCTTGGCCAGAATAAGGAGTATGCAATTGACTACTACAGATATGGTTTTACTATAAGTGGCCTGTATATGGTTTTGGGTCTTGCAAGTGTAAGCAGTATGGAGGATATTCAATTGGATATCAGTTGGGACGATGCTGTCTGTCCCATATGCTTGGATTTTCCTCATAACAGTGTTCTCCTTCGGTGTTCATTTTATGATAAAGGATGTCGTGCTTTTGTTTGTGACACAAATCAATTGCACTCTAATTGTTTGGATCGCTTTAAAAATTCATGTGGCATGCCATCCTCTCCAGCGTCTAATGCAATTTCCACTGAAAGTACTGAAAATAGTGATGATCCTGAGGTATCAAATGGTCAATGCAATCTGACTTGCCCCTTGTGTAGAGGTGAGGTTTCTGGGTGGGTTATAGTTGATAAAGCTCGCATTCATCTTGATGAGAAGAAGCGTTGTTGTGATGAGGTGCGATGCACTTTCATGGGAAGTTACTTGGAGCTACAGACACATGCTCAACTTGAACACCCTCATGCACGTCCGTCAAAAATTGATCCTGCCCGCCTGCTTGATTGGGAGAATTTTCAACAATCGTCAGAGATCATAGATGTTTTGAGTACTATTCATTCAGAAATCCCCAGAGGGGTGGTTCTAGGAGATTATGTGATTGAATATGGGGATGATGATGCTAGAGACGAGTTTGAAGACTTCCCTGGAGATGAGGGCAACTGGTGGACCTCATGTATTCTATATTTCGACAACTTTAGAAGATCCAGAAATAGAAGAAGGACGAGAGTCAGTCATACAAGAAGGGATAATCGCCGTTTAAGTTATGATACTTCAAATTCTGATGAAGGGGTAGCAGTGGTTATCGCAGATCCCATAGATGCCGTTCCCGCTTTTATGACTATTAGGCAGCATGTGAATTGA 1320 0.425 MAEEFVKGSVHQNGVALITLDRLKEVNVFCFVCGFPSYELIHERASTRQVYECSRKIQDFFTRPSGMQKRNDLTSQYNAGGYIPQQDGAGDAAHGVFEIEDFGGCFDRTDSHTTMIDGLGVAGWGVGGIEAAMLGQNKEYAIDYYRYGFTISGLYMVLGLASVSSMEDIQLDISWDDAVCPICLDFPHNSVLLRCSFYDKGCRAFVCDTNQLHSNCLDRFKNSCGMPSSPASNAISTESTENSDDPEVSNGQCNLTCPLCRGEVSGWVIVDKARIHLDEKKRCCDEVRCTFMGSYLELQTHAQLEHPHARPSKIDPARLLDWENFQQSSEIIDVLSTIHSEIPRGVVLGDYVIEYGDDDARDEFEDFPGDEGNWWTSCILYFDNFRRSRNRRRTRVSHTRRDNRRLSYDTSNSDEGVAVVIADPIDAVPAFMTIRQHVN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01893 439 Pfam Aconitase family (aconitate hydratase) 109 140 IPR001030 -
Gma17g01893 439 Gene3D Aconitase, domain 3 103 142 IPR015931 -
Gma17g01893 439 SUPERFAMILY Aconitase iron-sulfur domain 105 135 IPR036008 -
Gma17g01893 439 PANTHER OS02G0150900 PROTEIN 164 420 - -
Gma17g01893 439 Pfam Protein of unknown function (DUF1644) 176 336 IPR012866 -
Gma17g01893 439 PANTHER OS01G0612600 PROTEIN 164 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01893 Gma-Chr17 32974176 32988153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01893 - - gmx:100811028 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01893 17 32974176 32988153 Gma14g01209 14 19531017 19532887 GST
Gma17g01893 17 32974176 32988153 Gma06g00674 06 6123713 6127745 PCT
Gma06g00674 06 6123713 6127745 Gma17g01893 17 32974176 32988153 PCT