Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01858 ATGGCTCCAAGCTTTGATTTTGCCAATAGGTGGATGAAGGAGACTCAAAAGGGTACCCCAGTTGTGGTCACAATGGAGAACCCTACTTTCTCTGTTGTGGAGATTAATGGTGCTGATGCTGCATTCATGCCAGTGGAGAAAACACGTGGCAAGAATGCTAAGCAAGTCACATGGTTCTTGTTTCTCAAGGCTTACCATGCTATTGGCTGTGTAACTTGGTTTGCCACAGTTTTGTGGTCTTTCATGGGAGCTATAGGGAAGAGGTTGATTCATAGGGAGGGTTTGGCCTTGGAGAGTGAGAAGTTGGAGAAGGGGAAGATTCTGTTTAGGGTCATCAAGGTGTTCGTTGTGAGTTCTTTGGTGGTTATGGTGTTTGAGGTGGTGGCTTACTTGCAAGGCTGGCATTTTGGGAATCCAAGTTTGCACATTCCTCGCCCTGTGGATTTGGAAGGACTGATGTACTTGGTTTATGTTGCTTGGCTGACCTTTCGTGGCGAGTACATTGCTCCACCAATGCAGGCACTTTCAAAGTTTTGTATTGTTCTGTTCCTTATACAGTCAGTGGACCGTATGATGCTTTGCTTTGGGTGCTTTTGGATAAAATACAAGAGGATTAAGCCTAAGATTGACGGGGATGCCCTCAAGGTTGATGATATTGAAGGATCTGCGTGTAACCATCCCATGGTTCTAGTTCAGATTCCCATGTGTAATGAGAGGGAGGTGTATGAGCAGTCTATTTCTGCAGTATGCCAAATTAATTGGCCAAGGGACTGTTTACTAATTCAAGTACTTGATGATTCGGATGATGAGAGCATACAGTGGTTAATTAAGACTGAGGTCACAAAATGGAGCCAAAAGGGAATCAACATAATCTACAGGCATCGCTTAGTCAGGACGGGATATAAAGCTGGGAATCTCAAGTCTGCAATGAGCTGTGACTATGTGAAAGACTATGAGTTTGTTGCAATTTTCGACGCAGATTTCCAACCAAATCCTGATTTTCTTAAGCAAACCGTGCCATATTTCAAGGACAATCCTGAATTAGGCCTTGTCCAAGCTAGATGGGCTTTTGTGAACAAGGATGAGAACTTGTTGACACGTCTCCAGAACATTAACTTATGCTTCCATTTTGAGGTAGAACAGCAGGTCAATGGGGCATTTCTCAACTTTTTTGGATTTAATGGAACTGCTGGTGTTTGGAGAATCAAGACCCTAGAAGAGTCCGGGGGCTGGCTCGAGAGGACCACCGTAGAAGATATGGATATTGCCGTCCGAGCACATCTCAATGGCTGGAAATTTATCTTTGTAAATGATGTTAAGGTACTTTGTGAAGTTCCTGAGTCCTATGAAGCTTATAGGAAGCAGCAGCACCGGTGGCATTCCGGTCCAATGCAACTTTTCAGATTGTGTCTTCCAGCAATTTTGAGATCTAAGATATCACCATGGAAGAAAGGGAATTTAATACTGCTATTCTTTCTGTTGAGAAAACTCATTCTTCCCTTTTACTCCTTCACCTTATTTTGCATAATTCTTCCTTTAACCATGTTCGTCCCGGAGGCCAAGCTTCCTCTATGGGTGATCTGCTATATACCTGTATTTATGTCATTCCTCAACATTCTTCCTGCCCCGAAATCTTTTCCTTTTCTTGTTCCATACCTTCTTTTTGAAAACACCATGTCTGTCACCAAATTCAATGCCATGATCTCTGGACTCTTCCAGTTGGGTAGTTCTTATGAATGGATTGTCACAAAGAAGGCTGGCAGGTCATCAGAGTCCGATTTAGTGGCGGCAGCAGAAAGGGAAGCCAAGTCAATAATAGAACAACAAAAGATCCATAGAGGAGCTTCTGACCGTGTACTTGTTGAGTCAAACCAAAGTAAGGAACATAAAGAAACAAGTGGAAAACCTGTTAAGAAAGCTAACAAAATATATAAGAAAGAGTTGACTTTGGCATTCCTCTTACTCACAGCTTCTGTCAAGAGTCTGTTGTCTGCACAAGGAGTTCACTTTTACTATCTTCTTTTCCAAGGAGTGACTTTCCTCCTTGTTGGTCTTGATCTAATTGGGCAGCAGATGAGCTAG 2082 0.4284 MAPSFDFANRWMKETQKGTPVVVTMENPTFSVVEINGADAAFMPVEKTRGKNAKQVTWFLFLKAYHAIGCVTWFATVLWSFMGAIGKRLIHREGLALESEKLEKGKILFRVIKVFVVSSLVVMVFEVVAYLQGWHFGNPSLHIPRPVDLEGLMYLVYVAWLTFRGEYIAPPMQALSKFCIVLFLIQSVDRMMLCFGCFWIKYKRIKPKIDGDALKVDDIEGSACNHPMVLVQIPMCNEREVYEQSISAVCQINWPRDCLLIQVLDDSDDESIQWLIKTEVTKWSQKGINIIYRHRLVRTGYKAGNLKSAMSCDYVKDYEFVAIFDADFQPNPDFLKQTVPYFKDNPELGLVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGAFLNFFGFNGTAGVWRIKTLEESGGWLERTTVEDMDIAVRAHLNGWKFIFVNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAILRSKISPWKKGNLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAKLPLWVICYIPVFMSFLNILPAPKSFPFLVPYLLFENTMSVTKFNAMISGLFQLGSSYEWIVTKKAGRSSESDLVAAAEREAKSIIEQQKIHRGASDRVLVESNQSKEHKETSGKPVKKANKIYKKELTLAFLLLTASVKSLLSAQGVHFYYLLFQGVTFLLVGLDLIGQQMS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01858 693 SUPERFAMILY Nucleotide-diphospho-sugar transferases 226 529 IPR029044 -
Gma17g01858 693 Pfam Glycosyl transferase family group 2 321 527 IPR001173 -
Gma17g01858 693 PANTHER - 1 693 - -
Gma17g01858 693 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 1 693 - -
Gma17g01858 693 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 446 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01858 Gma-Chr17 31876629 31879738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01858 1 693 Miscellaneous Gene Families AT4G31590 76.724 0.0 1084
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01858 - - gmx:100790165 1375.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01858 17 31876629 31879738 Gma17g01858 17 31876629 31879738 ECH