Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01840 ATGAGGATCGAGCAAGAGAGTGATGGAGTCTCCGCTTCCACAAAGCACCTCGTCTTTGCGTATTACGTCACTGGTCATGGTTTTGGCCATGCCACTCGAGTCACTGAGGTGGTGCGGCATTTGATTCTTGCGGGGCATGATGTGCATGTGGTCACTGGTGCTCCTGATTTTGTTTTCACCTCTGAAATACAGTCTCCTCGcctattcattcgcaaaGTGCTTTTGGACTGTGGAGCTGTTCAGGCTGATGCTTTGACTGTTGATCGTCTTGCCTCTTTGGAGAAGTATTCTGAAACGGCAGTGAAGCCGCGTGCTCAAATCTTGGCTCAAGAAACTGAGTGGCTGAACTCTGTCAAAGCAGACTTAGTGGTCTCCGATGTTGTCCCAGTTGCATGTCGAGCAGCAGCAGATGCTGGCATTCGCTCTGTTTGTGTGACCAATTTCAGTTGGGACTTCATCTATGCAGAGTATGTCATGGCTGCTGGACTTCATCATCGTTCAATAGTTTGGCAGATAGCCGAGGACTATTCTCATTGCGAGTTCCTTATCCGCCTCCCGGGATATTGCCCAATGCCTGCTTTTCGTGATGTTATTGACGTCCCTCTGGTAGTGAGGAGGTTACACAAATCTGCAAAAGAGGTTAAGAAGGAACTTGGGGTAACTGATGATGTGAAGCTAGTTATTCTCAACTTTGGTGGGCAGCCATCAGAATTGAAGCTAAAGGAGGAATTCTTACCACCTGGCTGGTTGTGCCTGGTTTGTGGTGCTTCAGAGACTGCAGAACTTCCGCCTAACTTTGTAAAACTTGCTAAAGATGCATATACGCCGGACATTATTGCGGCATCTGACTGTATGCTTGGaaaaattggatatggcactgttagcgaggccttggcatacaagtgtccttttgtctttgtccgtagagattatttcaatgaagaaccttttttgagaaatatgcttgagTTttatcaaggtggtgttgaaatgattaggagggatttactgactggtcactggagaccttatcttgaacgtgcaataagtttgaaaccctgctatgaagcaggcattaatggtggtgagGTGGCAGCCCACATACTGCAGGAGACGGCTTTTGGAAAAAGTTATGCATCAGATAAGCTTAGTGGGGCAAGAAGATTGCGTGATGCCATAGTTCTTGGGTATCAACTCCAAAGGGCCCCTGGTCGAGATATTACAATCCCAGAATGGTATGCAACTGCTGAAAACCAACTTGGCCGCACAACACCTGGTTCCCCTGTGGATGATGGAAGATCTGCGTTTAGCTTGGACATTGAAAACTTTGACATTCTTCATGGAGATATTCAAGGACTTCCAGATACTGTGGCATTCTTACAGAACCTATCTGAATTACAGGACAAGCACACAAGGCGGGAGCGTAAGGCTGCGGCTAATCTCTTCAACTGGGAGGAAGAAATATTTGTGACAAGAGCTCCTGGAAGGTTGGACGTTATAGGTGGTATTGCTGACTATTCTGGAAGTCTTGTCCTGCAGATGCCAATTAAAGAAGCCTGCCATGTTGCTTTACAAAGAAACCATCCAAGTAAACATAGGCTATGGAAACATGCTGAGGCTCGACAGAATGACAAAGGGAGAAATCCAACTGCTGTCTTGCAAATCGTATCATTTGGCTCAGAATTGAGCAATCGTGGCCCAACATTTGACATGGATTTATCTGATTTTATGGATGAAGACAAGCCAATCTCATATGAGAAAGCAAAGAAATACTTTGCTCAAGATCCTTCCCAAAAGTGGGCAGCATATGTTGCAGGGGCAATTTTGGTCTTAATGACTGAATTGGGTGTTCAATTTGAAGATAGTATCAGCATGCTGGTTTCATCTGCAGTCCCAGAAGGGAAAGGTGTATCATCTTCTGCATCTGTGGAGGTTGCTAGTATGTATGCTATTGCAGCTGCTCATGGATTAAATATCAGCCCAAGGCATCTGGCCATACTCTGCCAGAAGGTGGAAAACCACATTGTAGGAGCACCATGCGGTGTCATGGACCAGATGGCTTCTGCATGTGGTGAAGCCAACAAACTTCTTGCTATGATTTGCCAGCCTGCAGAGATTGTTGGCCTTGTTGATATTCCCAGCCATATCCGTTTCTGGGGAATTGATTCTGGAATAAGACACAGTGTTGGAGGTGCAGACTATGGTTCTGTTAGAATTGGTGCCTTTATGGGTATGAAGATGATAAAGGCCAAGGCATCTGAGGAATTGTCTGAGACTTGTGCTGCTAATGGGTTGAGCTATGATGAAGTGGAACAAGATGATATAGAACTACTTAAACAGGAAACCTCCTTAGATTACTTATGTAACTTGCCACCTCATAGATTTGTGACTCTGTATGCTAAGACAATTCCTGAGTCCATTGTTGGTGAGACATTTTTGGAGCAATATCAAAATCATAATGATCCTGTCACTACTATTGATCCGAAGCGTACTTACGGAGTTAGAGCTCCCACAATGCATCCCATATTTGAAAATTTCCGAGTCGTGAACTTGAAAGCACTTTTAACATCTGCAGCTTCAACCTATCAGCTTACAGCCTTAGGAGAATTGCTATATCAGTGCCACTACAGCTACAGTACTTGTGGACTTGGATCTGATGGAACAGATAGGCTTGTAAACTTAGTGCAAGAGTTGCAGCACAGTGCAGCATCTAAAGCTGAAGGTGGGACATTATATGGAGCCAAGATAACTGGTGGTGGTTCCGGTGGAACAGTTTGTGTAGTTGGCAGAAACTGTCTCAAGAGCAGTGAACACATTTTTGAGGTTCAGCAGAGGTACAAGAATGCTACTGGTTATTTGCCCTTCATTTTTGAGGGTTCATCCCCAGGTGCTGGAAAATTTGGGTACCTAAAAATACGCCGTCGAGCTACCCCAGAAAAGGCGAACTCTAGCGAGGATGATGGTGCACTCACCCCGGAAAAGCCTAATGCCAGCGAGGATGATGGTGCAGTTGTGGTGGAGAATAAGAGTTGA 3033 0.4184 MRIEQESDGVSASTKHLVFAYYVTGHGFGHATRVTEVVRHLILAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVKPRAQILAQETEWLNSVKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGLHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSAKEVKKELGVTDDVKLVILNFGGQPSELKLKEEFLPPGWLCLVCGASETAELPPNFVKLAKDAYTPDIIAASDCMLGKIGYGTVSEALAYKCPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWRPYLERAISLKPCYEAGINGGEVAAHILQETAFGKSYASDKLSGARRLRDAIVLGYQLQRAPGRDITIPEWYATAENQLGRTTPGSPVDDGRSAFSLDIENFDILHGDIQGLPDTVAFLQNLSELQDKHTRRERKAAANLFNWEEEIFVTRAPGRLDVIGGIADYSGSLVLQMPIKEACHVALQRNHPSKHRLWKHAEARQNDKGRNPTAVLQIVSFGSELSNRGPTFDMDLSDFMDEDKPISYEKAKKYFAQDPSQKWAAYVAGAILVLMTELGVQFEDSISMLVSSAVPEGKGVSSSASVEVASMYAIAAAHGLNISPRHLAILCQKVENHIVGAPCGVMDQMASACGEANKLLAMICQPAEIVGLVDIPSHIRFWGIDSGIRHSVGGADYGSVRIGAFMGMKMIKAKASEELSETCAANGLSYDEVEQDDIELLKQETSLDYLCNLPPHRFVTLYAKTIPESIVGETFLEQYQNHNDPVTTIDPKRTYGVRAPTMHPIFENFRVVNLKALLTSAASTYQLTALGELLYQCHYSYSTCGLGSDGTDRLVNLVQELQHSAASKAEGGTLYGAKITGGGSGGTVCVVGRNCLKSSEHIFEVQQRYKNATGYLPFIFEGSSPGAGKFGYLKIRRRATPEKANSSEDDGALTPEKPNASEDDGAVVVENKS 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01840 1010 Pfam Galactokinase galactose-binding signature 482 525 IPR019539 -
Gma17g01840 1010 PRINTS Mevalonate kinase family signature 493 517 - -
Gma17g01840 1010 PRINTS Mevalonate kinase family signature 629 651 - -
Gma17g01840 1010 PRINTS Mevalonate kinase family signature 672 691 - -
Gma17g01840 1010 PRINTS Mevalonate kinase family signature 913 930 - -
Gma17g01840 1010 SUPERFAMILY Ribosomal protein S5 domain 2-like 480 705 IPR020568 -
Gma17g01840 1010 Gene3D Glycogen Phosphorylase B; 208 350 - -
Gma17g01840 1010 SUPERFAMILY GHMP Kinase, C-terminal domain 716 966 IPR036554 -
Gma17g01840 1010 PANTHER MEVALONATE KINASE/GALACTOKINASE 17 973 - -
Gma17g01840 1010 Pfam GHMP kinases C terminal 864 938 IPR013750 -
Gma17g01840 1010 Gene3D Glycogen Phosphorylase B; 13 168 - -
Gma17g01840 1010 Gene3D - 823 951 IPR036554 -
Gma17g01840 1010 MobiDBLite consensus disorder prediction 976 1010 - -
Gma17g01840 1010 PIRSF Gal_kin_glcsltr 1 978 IPR012369 -
Gma17g01840 1010 Pfam GHMP kinases N terminal domain 626 691 IPR006204 GO:0005524
Gma17g01840 1010 Gene3D - 465 719 IPR014721 -
Gma17g01840 1010 PANTHER L-ARABINOKINASE 17 973 - -
Gma17g01840 1010 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 23 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01840 Gma-Chr17 30194688 30208963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01840 K12446 - gmx:100787860 2021.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01840 17 30194688 30208963 Gma14g01264 14 22154313 22170744 GST