Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01804 ATGGCGCAGCAACTTGGAGTTCCATTTAAGTTATCATGCAAACCCTCTCACATTCACGCTCTTAAACCCTTTCACTCTCTCCCTCCCCTTCGCACCTTCACCCCCAAACCTTCTCTTAATGCCAAATCCCATCATCATCATCATCCTTTATTAACGCTTCTTCGTTCCCACCGCACTCTCGCACCCTGCTGCAACTCCAACAAATCAGATATAATGTCACAATTGGAGCTTGGGAAACCGGAGCAAAAGGGGAAACCGGAGAAGCGAGTAAATGGTATATTCTGGATCATTCTCCTCAACATTGCCATATTCGTCGCTGACCACTTTTTTCGGGTTAATGGGATCAAGGCTTTATACTTGTACCACAATTGGCCTTCTTGGTACCAGTTTGTCACAGCTACATTTTGTCATGCTAATTGGAAGCATCTTTCTAGCAACCTTTTCTTCTTGTACATTTTTGGAAAGCTTGTTGAAGAAGAGGAAGGGAACTTTGCTTTGTGGCTTTCTTACATTCTTACTGGTGTAGGAGCCAACCTTGTTTCATGGTTGGTTTTACCAAGAAATACGGTTTCTGTTGGAGCTTCTGGTGCTGTTTTCGGGTTATTTTCTATCAGTGTCCTTGTAAAGATGTCCTGGGATTGGAGGAAGATCCTTGAAGTGCTTATATTGGGTCAGTTTGTTATAGAGAAGGTCATGGAAGCAGCCCAAGCTTCAACATCATTGTCAGGCCGAGGAGGCTACGCATTGCAAAGTGTAAATCACATTGCACATCTTTCTGGTGCTCTTGTTGGTGTGCTTTTGGTTTGGCTCCTTAGCAAAGTTCCTTCAGATCCTTCTGACCAATAA 846 0.4374 MAQQLGVPFKLSCKPSHIHALKPFHSLPPLRTFTPKPSLNAKSHHHHHPLLTLLRSHRTLAPCCNSNKSDIMSQLELGKPEQKGKPEKRVNGIFWIILLNIAIFVADHFFRVNGIKALYLYHNWPSWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANLVSWLVLPRNTVSVGASGAVFGLFSISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTSLSGRGGYALQSVNHIAHLSGALVGVLLVWLLSKVPSDPSDQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01804 281 Pfam Rhomboid family 126 273 IPR022764 GO:0004252|GO:0016021
Gma17g01804 281 SUPERFAMILY Rhomboid-like 91 275 IPR035952 -
Gma17g01804 281 PANTHER RHOMBOID-RELATED PROTEIN 30 280 - -
Gma17g01804 281 Gene3D - 87 276 IPR035952 -
Gma17g01804 281 PANTHER RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED 30 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01804 Gma-Chr17 27550196 27553542 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01804 - - gmx:100781449 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01804 17 27550196 27553542 Gma17g01804 17 27550196 27553542 ECH