Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01418 ATGCAATCCTCAAAGGAGAAGATGAAAAACATGGCAAGTGCTGCCAAGGAACAAGTCGACATCTATAAAGCCAAAATAGACGAGAAGGCAGAGAAAGCAACGGCAAGAACAGAAGAGGAGAGGGTGATAGCCCATGAGCACGCAAAGGCAAAGGAAGCTGGAGCAAAGATGGAGCTGCATGAAGCTAAAGCAAGGCATGCAGCAGAGAAGCTAAGCGCCAACCAATCACATTATGGTCTCCACCATGGCCACAACAACCCTCCCTTAGTAGGAACAACTCAGACTCACTACCAGCAAGGGCACCAGCACCAGCCACTTGGGGCAGTTCCTATGCCTGGAACCACTTATCCATCTTATCCACTAGGAGGAAACCCTAACCCTCCAAGGAACAAACATATATAA 402 0.4851 MQSSKEKMKNMASAAKEQVDIYKAKIDEKAEKATARTEEERVIAHEHAKAKEAGAKMELHEAKARHAAEKLSANQSHYGLHHGHNNPPLVGTTQTHYQQGHQHQPLGAVPMPGTTYPSYPLGGNPNPPRNKHI 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01418 133 MobiDBLite consensus disorder prediction 77 133 - -
Gma17g01418 133 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6 1 128 - -
Gma17g01418 133 MobiDBLite consensus disorder prediction 49 68 - -
Gma17g01418 133 Coils Coil 5 32 - -
Gma17g01418 133 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 1 128 IPR005513 GO:0009793
Gma17g01418 133 MobiDBLite consensus disorder prediction 87 102 - -
Gma17g01418 133 Pfam Late embryogenesis abundant (LEA) group 1 1 70 IPR005513 GO:0009793
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01418 Gma-Chr17 13321059 13321957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01418 - - gmx:548013 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01418 17 13321059 13321957 Gma17g01418 17 13321059 13321957 ECH
Gma17g01418 17 13321059 13321957 Gma05g01130 05 32234382 32235470 GST