Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01410 ATGGTTACTAAAGTTCATGCAGGGGTGGAAATGGCAATGGCTGGTCATGAGAGTGGAAGTACTGGGAATTGGAGGAAAAAAGTGGTTTTTATAGGTGACCAACTGAGGAGGTTTCCTAGTTTGGCTTGGAAAAATGTTTGGAAGATGGGGCGTGATGATCCAAGAAGGGTCATCCATGCATTCAAAGTAGGTTTCTCTCTCACTCTTGTGTCTTTGCTCTATCTCTTGGACCCAAGCTTCCAAGGGATAGGAGAGAATGTTATGTGGGCTGTTATGACTGTCGTCGTTGTCTTTGAGTTTACCGCAGGGGCAACTTTATGCAAAGGGCTGAACAGAGGATTAGGGACAGTGATTGCAGGAGCACTGGCATTTTCTGTTAAATATGTTGCGAATGGATTTGACAATGGATCTGACCGCGTATTTCATGCTCTTTTCATTGGAACCACCGTTTGTATAATAGGTGCTGCAACCAGTTATATGAGGTTCTTCCCCTACATAAAAAAGAATTATGATTATGGGGTCCTTATATTTCTCTTGACCTTCAACTTGATAACTGTTTCGAGTTACCGGACCGAAAATCTCTTCAAGATGATATACCAGCGCTTCTACACCATAGCCATAGGCTGTGCCATATGCCTTCTGATGAGTCTATTGGTATTTCCAAATTGGTCAGGGGAAGCTCTCCATAATTCAACAGCTTTCAAGCTTGAAGGCCTAGCTAAATCTATAGAAGCTTGTGTCAACGAATACTTTAACGGAGAAATGGAAGCCTCTAATGATAAAATATCATCTGAGGATATATACAAAGGTTACAAGGCTGTTTTGGATTCAAAAACCACTGATGAAACACTGGCATTACATGCAAGTTGGGAGCCAAGACATTCATGTCACAAATTTCCATGGCAGCAGTATGTAAAAGTTGGAACTGTTCTTCGTCAATTTGGGTATACGGTGGTAGCCCTACATGGCTGTTTGAAAACAGAAATTCAGACACCACAATTTGTTCGAGTCCTATTCAAGAACCATTGCACAAGACTTGCCAAAGAGGTATCAAAAGTGCTGATAGAACTTGCCAATAGCATAAGGAACCGTCGTCATTGCTCCCAAGAAATCCTCTCTGACAATCTCAAAGAAGCCCTGTTGGATCTCAACACTGCCATAAAATCTCAGCCTAGACTCTTCTTAGGCTCCAATGACTACCAAGACAACAACATGCCGGTCATACCCGGATCACAAGAAGCAGGGAAGAAGACAAACGATGCAAATGGTGTTAAAACGGACTCTTTGGCATTGCAAGAGTGCAAAACCAAAAGGGCATGCACCGAACAAGAACCACCAAAGGAATTAGCAGAACGAAAGGTGTTAATAAGATCCCAGTTGACTAAAATCGTGATCACTAGTCTTGAGTTCTCTGAAGCCTTGCCTTTTGCTGCATTTGCATCTTTGCTTGTGGAGACTGTGGTAAAACTGGACTCTGTTATTGAGGAAGTTGAAGAACTTGGAAGGTTAGCATGCTTCAAAGAATACATAACCGATGACAAGATTATTGTGAGTTTTGGTCATCTGTGGATGGCATATTGCATTCCAAACTCACCATCACTCCAGGGTTGGAAGACAGGTCCATGTTGTTTATTCGGCTGGAACATAGGCAAGAATAGAGTTAATGGCAAACCTCAGATTAAGTACCATGATATTGATCTTACATTCCCAACTTCTCTGGTCGACAAAACATTTTTGAGAGGGAAGGAGCTCAAATGCTGCTATAGGGCTACAATTGATGGATTCAGTGCAACCAATTTCCACGAATGTTGTGACTTCAAGGGCCCATGTGTGATAATCGGCTATACAAACAAGTCTTTCAAGTTTGGTGCATTTAACCCTGAAGGGTATAGAAGCACAGATGACTACTACGACACATTTGATGCCTTCCTATTTTACTGGATAGACAATGAAACTACTAAACCCATCATGTTGCCCAAGGTTGGTGGAAGTGGTGCAGCCCTCTTTGATTATGCACGTGGGGGCCCACAATTTGGAGCAGATGGGCTTCTCATTGGGCCCCCATTGGCCCCAGTTATGGGTGGCTTTGCTGGGCCTGATACCAATTCTGGCATTGGTGATTTAAGACAAGCCAAGTCTAGATTGGGATTGTCTTATGCCAAAAGAGAGGATGGGAAAGAGTCCATTTTTGGTGATGAGTCAAGGGCTACCCTTGAAGAAGTGGAAGTCTTTTGTAGTCCTCAAATTGCAAGCTTATATTAG 2262 0.4275 MVTKVHAGVEMAMAGHESGSTGNWRKKVVFIGDQLRRFPSLAWKNVWKMGRDDPRRVIHAFKVGFSLTLVSLLYLLDPSFQGIGENVMWAVMTVVVVFEFTAGATLCKGLNRGLGTVIAGALAFSVKYVANGFDNGSDRVFHALFIGTTVCIIGAATSYMRFFPYIKKNYDYGVLIFLLTFNLITVSSYRTENLFKMIYQRFYTIAIGCAICLLMSLLVFPNWSGEALHNSTAFKLEGLAKSIEACVNEYFNGEMEASNDKISSEDIYKGYKAVLDSKTTDETLALHASWEPRHSCHKFPWQQYVKVGTVLRQFGYTVVALHGCLKTEIQTPQFVRVLFKNHCTRLAKEVSKVLIELANSIRNRRHCSQEILSDNLKEALLDLNTAIKSQPRLFLGSNDYQDNNMPVIPGSQEAGKKTNDANGVKTDSLALQECKTKRACTEQEPPKELAERKVLIRSQLTKIVITSLEFSEALPFAAFASLLVETVVKLDSVIEEVEELGRLACFKEYITDDKIIVSFGHLWMAYCIPNSPSLQGWKTGPCCLFGWNIGKNRVNGKPQIKYHDIDLTFPTSLVDKTFLRGKELKCCYRATIDGFSATNFHECCDFKGPCVIIGYTNKSFKFGAFNPEGYRSTDDYYDTFDAFLFYWIDNETTKPIMLPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTNSGIGDLRQAKSRLGLSYAKREDGKESIFGDESRATLEEVEVFCSPQIASLY 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01410 753 Pfam TLD 587 654 IPR006571 -
Gma17g01410 753 Pfam Aluminium activated malate transporter 47 501 IPR020966 GO:0015743
Gma17g01410 753 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-RELATED 16 513 - -
Gma17g01410 753 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 16 513 - -
Gma17g01410 753 ProSiteProfiles TLDc domain profile. 559 747 IPR006571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01410 Gma-Chr17 13195625 13217788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01410 1 509 Miscellaneous Gene Families AT4G17970 58.000 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01410 - - gmx:100780744 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01410 17 13195625 13217788 Gma17g01410 17 13195625 13217788 ECH