Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01383 ATGAAATTCGCTTATAACCTAGTGATGATTTTCTTTATCTTTCTCTTTCAATACTCAAACGGCTCCAACCTTATCCTTCAATCATGCAAAGAGGCCTCAAAGAATGATCCAAATTTGAGCTATGATTTCTGTTTTGCATCCCTTGAAGAAGCCTTATCCAAGTGTCACCCACCACCCACCAACCTTGAAGACCTTGTGGGCATGTCAATTAATCTATCCAAATCCAACGTAACCAACATGGTTTCCATCATTTCAAACCTATTGAAGAACAAAACTTTTGATCAATACACTAAGGCTTGCCTAAAAGATTGCTTCGATCTTTACTCGGATTCGCTTTCGGCTTTAGATGATGCTGTGGTTGCTTTCAAGTCCAAGGATTTGGGCACGGCTGGTATAAACTTGAGTGCTTCCTTGGATAATTCTGTTACATGTGAAGATCAATTCAAGGATAAGAAAGGTGAAACTTCTCCTATAACAAAGGAGAACAACGTGTACTTCCAACTCAATGTAATATCTCTAGCCTTCATCCAAATGTTTCGTCAACATTATTGA 552 0.3859 MKFAYNLVMIFFIFLFQYSNGSNLILQSCKEASKNDPNLSYDFCFASLEEALSKCHPPPTNLEDLVGMSINLSKSNVTNMVSIISNLLKNKTFDQYTKACLKDCFDLYSDSLSALDDAVVAFKSKDLGTAGINLSASLDNSVTCEDQFKDKKGETSPITKENNVYFQLNVISLAFIQMFRQHY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01383 183 Pfam Plant invertase/pectin methylesterase inhibitor 24 174 IPR006501 GO:0004857
Gma17g01383 183 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 13 179 - -
Gma17g01383 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 179 IPR035513 -
Gma17g01383 183 SMART PMEI_2 20 175 IPR006501 GO:0004857
Gma17g01383 183 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 178 IPR006501 GO:0004857
Gma17g01383 183 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Gma17g01383 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 179 IPR035513 -
Gma17g01383 183 CDD PMEI-Pla_a_1_like 29 178 IPR034088 -
Gma17g01383 183 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01383 Gma-Chr17 12818021 12818766 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01383 - - gmx:100817110 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01383 17 12818021 12818766 Gma17g01383 17 12818021 12818766 ECH