Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01373 ATGGATCAGTTGTCGGCGATCAGCGAGGACCTGGCCGAGATCGACGGACACATCGCCGACAATTTCCGCGCCCTATCAAATGGATTTCAGAAGTTGGAGAAGATTAAGGATTCGAATAGACAGAGCAGGCAGTTGGAAGACCTCACGGAAAAATTGCGAGAATGTAAACGGCTTATTAAGGAGTTTGATAAAGAAGTCAAAACATTGGAGAGTAGCTTTGATAGAGAAACCAACAAAATGTTGAATGAGAAAAAGCAGTCAATGATCAAAGAGCTAAACTCATATGTTGCTCTGAAAAAACAGTATGCTACAAATATTGAGAATAAACGAATTGAACTCTTTGAGGGGCCCAATGAAGGTTATGCAGAAGAAAATGGCTTGCTAGCATCCTCAATGACAAACGAACAGCTAATGGATCATGGAAATCGGATGATGAATGAGACAGATCAAGCCATTGAAAGGGGAAAGAAGGTAGTTCAAGACACCATAAATGTTGGTACAGATACTGCAGCAGCTCTTAAGGCTCAGACGGAACAAATGAGCAGAGTTGTCAATGAGCTGGATTCAATCCATTTCTCTATAAAGAAAGCCTCTAAATTGGTCAAGGAAATCGGTAGGCAGGTTGCTACTGACAAGTGTATTATGGCGCTTCTTTTCCTTATTGTCATTGGAGTAATTGCAATCATTATTGTAAAGCTTGTGCACCCAGAAAACAAGGACATTCGCGACATTCCAGGACTAGCTCCTCCAGTTCAGAACCGAAGACTGCTCTGGAGTCACAGTTGA 786 0.4198 MDQLSAISEDLAEIDGHIADNFRALSNGFQKLEKIKDSNRQSRQLEDLTEKLRECKRLIKEFDKEVKTLESSFDRETNKMLNEKKQSMIKELNSYVALKKQYATNIENKRIELFEGPNEGYAEENGLLASSMTNEQLMDHGNRMMNETDQAIERGKKVVQDTINVGTDTAAALKAQTEQMSRVVNELDSIHFSIKKASKLVKEIGRQVATDKCIMALLFLIVIGVIAIIIVKLVHPENKDIRDIPGLAPPVQNRRLLWSHS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01373 261 Gene3D - 133 212 - -
Gma17g01373 261 SUPERFAMILY SNARE fusion complex 132 205 - -
Gma17g01373 261 Pfam Sec20 150 231 IPR005606 GO:0005484|GO:0006890
Gma17g01373 261 CDD SNARE_SNAP25N_23N_29N_SEC9N 139 203 IPR044766 GO:0005484|GO:0031201
Gma17g01373 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 142 204 IPR000727 -
Gma17g01373 261 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 1 250 - -
Gma17g01373 261 Coils Coil 38 79 - -
Gma17g01373 261 PANTHER NOVEL PLANT SNARE 11 1 250 - -
Gma17g01373 261 SMART tSNARE_6 137 204 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01373 Gma-Chr17 12629898 12634268 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01373 K08494 - gmx:100786429 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01373 17 12629898 12634268 Gma17g01373 17 12629898 12634268 ECH
Gma17g01373 17 12629898 12634268 Gma05g00637 05 6875596 6877772 GST