Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01370 ATGTTAATGCATCACCACCACAAGCCAGAGCTTCACATCGGAAAAGAGAACCCCCACCTCTCTTCCGATGACGCCGCCACTTCAACTCCACAAACCCATTTCTCAATTCAGGTTTCACCTTCCTCGCCCCATCCACCTCCACCAAACTCACCAAACACACCGTTCCACCATGAACGCTTCTCCAACAAGAGAATAATACCCATCATGACTTTCCCTCTGTTCCAAACACCCTTTGGCGCAAAGTTTCCAACTTCCAAGCTTCTCCCGCGTTTCCGCTTCCTCCTCTTCCTCCCCCTTCCTTCCCTCTACCTCCTCTTCTCAAACCCTAGCCCCTTAGATTTCTTCTCAGTTATCGCTTTCTCAGCAGCACTCTTCGTTTCCCTCAATTTGGCACTGTCTTTCTTCACTCGATTGTTCCCCACCAAATTCTCATCATCATCATCATCCTCTTCTCCTCAGCCTGTTGTATGGTCTATTGGGTCGAACCCTAAGCAAGTAAAGAACACAAATTGGGGGTGTTGGGTCCAAGTTTACAGCAATGGGGATGTTTATGAGGGTGAATTTCAAAAAGGGAAGTGTTGGGGGAGTGGGGTTTATCACTATCACATGCATGGGAGGTATGAGGGGGGATGGGTTGATGGAAAGTATGATGGGTATGGTGTTGAGACATGGGCTAGAGGGAGCAGGTATAGAGGGCAATATAGAGAAGGTTTGAGGCATGGAATGGGGATATATAAGTTTTACTGTGGGGATGTGTATGGTGGTGAGTGGTCTAATGGACAGTGTCATGGGTTTGGAGTCCACACTTGCATTGATGGCAGCCGCTATGTTGGGGAGTTCAAATGGGGAGTCAAACATGGACTTGGACAGTACCATTTCAGAAATGGGGACATATATGCTGGTGAATATTTTGCAGACAAGATGCATGGTTTTGGAGTGTATCAATTTCAGAATGGTCATCGGTATGAGGGGGCATGGCATGAAGGAAGAAGACAAGGACTGGGAATGTACACTTTCAGAAACGGGGAAACACAATGTGGTCATTGGCAGAATGGGATTCTTGATGATCCTAAAAGACATAATAGTCCTACTGGGTCTCCATGTGCTGTGGACCATGCCAAGGTTTTCAATGCAGTACAGGACGCACATTCTGCTGCTGAGAAAGCTTACAATATGGCAAAGGTGGATGACGGGGTGAATAAAGTAGTGGCTGCAGCTAATAAAGCAGCAAACACAGCCAGAGTTGCAGCTGTAAAGGCTGTGCAAAATAGGATGCACCATAATAATACAAGTAGTAGTAACAATTTAGGATTGTGGTGTGTTGTTGTTGTTGTAGCTATCAGTAGGGATAATAGGGCAGGGATGTACAAAGAACGAGAGCGAGGTGGTGTTTCCGTTTCCGCCTCTAAATCCGAGGATCGGAAGCGAATCAACGACGTTCTCGATAAGCACTTGGAACGATCCTCTCCTTCCACTTCCCGCCCCATCAACACCGCTTCCAAGAATTCCAACCTCCAAGTGGAGGAATCTGAGACGGAGAGTGAAGAGTCTGATGTTAGTGGCTCTGATGGGGATGACACCTCTTGGATCTCGTGGTTCTGTAATCTAAGAGGGAATGAGTTCTTTTGTGAGGTGGATGATGATTACATACAGGATGACTTTAACCTCTGTGGATTGAGCAGTCAAGTGCCCTACTTTGATTATGCCCTTGATTTGATTCTCGACGTTGAGTCATCCCATGGTGACATGTTCACGGAGGAACAGAATGAGTTGATTGAATCGGCGGCGGAAATGCTTTATGGTATGATTCATGCTCGATATGTGTTGACCAGCAAAGGAATGGCTGCCATGCTTGACAAATACAAGAGCTATGATTTTGGTAGATGCCCAAGAGTTTACTGCTCTGGACAGCCCTGCCTTCCAGTTGGTCAATCGGACATTCCTAGGTCAAGTACTGTGAAAATATACTGCCCTAGGTGTGAAGATCTTTACTATCCGCGTTCCAAGTATCAAGGCAACATTGATGGAGCTTACTTTGGAACAACATTTCCACACCTCTTCTTGATGACTTATGGACAACTGAAGCCACAGAAACCAGCACAAGGCTATGTTCCGAGAGTTTTTGGGTTCAAAGTTCACAAGCCATAA 2148 0.4628 MLMHHHHKPELHIGKENPHLSSDDAATSTPQTHFSIQVSPSSPHPPPPNSPNTPFHHERFSNKRIIPIMTFPLFQTPFGAKFPTSKLLPRFRFLLFLPLPSLYLLFSNPSPLDFFSVIAFSAALFVSLNLALSFFTRLFPTKFSSSSSSSSPQPVVWSIGSNPKQVKNTNWGCWVQVYSNGDVYEGEFQKGKCWGSGVYHYHMHGRYEGGWVDGKYDGYGVETWARGSRYRGQYREGLRHGMGIYKFYCGDVYGGEWSNGQCHGFGVHTCIDGSRYVGEFKWGVKHGLGQYHFRNGDIYAGEYFADKMHGFGVYQFQNGHRYEGAWHEGRRQGLGMYTFRNGETQCGHWQNGILDDPKRHNSPTGSPCAVDHAKVFNAVQDAHSAAEKAYNMAKVDDGVNKVVAAANKAANTARVAAVKAVQNRMHHNNTSSSNNLGLWCVVVVVAISRDNRAGMYKERERGGVSVSASKSEDRKRINDVLDKHLERSSPSTSRPINTASKNSNLQVEESETESEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYFDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGMIHARYVLTSKGMAAMLDKYKSYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPAQGYVPRVFGFKVHKP 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01370 715 MobiDBLite consensus disorder prediction 480 524 - -
Gma17g01370 715 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 172 276 - -
Gma17g01370 715 SMART CK_II_beta_2 528 711 IPR000704 GO:0005956|GO:0019887
Gma17g01370 715 Gene3D - 259 305 - -
Gma17g01370 715 Gene3D - 214 258 - -
Gma17g01370 715 Gene3D - 166 213 - -
Gma17g01370 715 Gene3D - 306 368 - -
Gma17g01370 715 SUPERFAMILY Casein kinase II beta subunit 526 714 IPR035991 GO:0005956|GO:0019887
Gma17g01370 715 PRINTS Casein kinase II regulatory subunit family signature 528 544 IPR000704 GO:0005956|GO:0019887
Gma17g01370 715 PRINTS Casein kinase II regulatory subunit family signature 675 692 IPR000704 GO:0005956|GO:0019887
Gma17g01370 715 PRINTS Casein kinase II regulatory subunit family signature 647 668 IPR000704 GO:0005956|GO:0019887
Gma17g01370 715 PRINTS Casein kinase II regulatory subunit family signature 625 646 IPR000704 GO:0005956|GO:0019887
Gma17g01370 715 PRINTS Casein kinase II regulatory subunit family signature 545 559 IPR000704 GO:0005956|GO:0019887
Gma17g01370 715 PRINTS Casein kinase II regulatory subunit family signature 600 621 IPR000704 GO:0005956|GO:0019887
Gma17g01370 715 MobiDBLite consensus disorder prediction 1 56 - -
Gma17g01370 715 MobiDBLite consensus disorder prediction 21 39 - -
Gma17g01370 715 MobiDBLite consensus disorder prediction 1 19 - -
Gma17g01370 715 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 23 427 - -
Gma17g01370 715 MobiDBLite consensus disorder prediction 490 507 - -
Gma17g01370 715 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 272 366 - -
Gma17g01370 715 SMART morn 297 318 IPR003409 -
Gma17g01370 715 SMART morn 251 272 IPR003409 -
Gma17g01370 715 SMART morn 320 341 IPR003409 -
Gma17g01370 715 SMART morn 182 203 IPR003409 -
Gma17g01370 715 SMART morn 228 249 IPR003409 -
Gma17g01370 715 SMART morn 274 295 IPR003409 -
Gma17g01370 715 SMART morn 205 226 IPR003409 -
Gma17g01370 715 Pfam Casein kinase II regulatory subunit 528 711 IPR000704 GO:0005956|GO:0019887
Gma17g01370 715 Gene3D - 626 700 - -
Gma17g01370 715 PANTHER MORN REPEAT PROTEIN 23 427 - -
Gma17g01370 715 ProSitePatterns Casein kinase II regulatory subunit signature. 629 660 IPR000704 GO:0005956|GO:0019887
Gma17g01370 715 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 521 625 IPR016149 GO:0005956|GO:0019887
Gma17g01370 715 Pfam MORN repeat 299 321 IPR003409 -
Gma17g01370 715 Pfam MORN repeat 322 343 IPR003409 -
Gma17g01370 715 Pfam MORN repeat 207 229 IPR003409 -
Gma17g01370 715 Pfam MORN repeat 230 248 IPR003409 -
Gma17g01370 715 Pfam MORN repeat 184 203 IPR003409 -
Gma17g01370 715 Pfam MORN repeat 255 275 IPR003409 -
Gma17g01370 715 Pfam MORN repeat 276 297 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01370 Gma-Chr17 12596526 12607293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01370 176 432 Acyl Lipid Metabolism Gene Families AT1G60890 29.961 8.00e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01370 - - gmx:100785377 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01370 17 12596526 12607293 Gma17g01370 17 12596526 12607293 ECH
Gma17g01370 17 12596526 12607293 Gma05g00632 05 6829776 6833137 GST