Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01285 ATGTCTTCTTTTAGAGCTCTCTTCTTCTTCTTTCTCATCAACGTCTCCTTGCTCCTCACACTCTCTTCTGCGGCGGATCCATTCGTTTCATACGAATTTGAAGTCTCTTACATCACTGCATCCCCTCTTGGAGTTCCTCAGCAGGTCATTGCTATCAACAACAAGTTCCCAGGTCCTATTATCAATGTTACTACAAACAACAACGTTGCTGTCAATGTTCGGAACAAGTTGGATGAGAGCCTCCTCATTCATTGGTCTGGGATTCAGCAAAGGAGGAGTTCGTGGCAAGATGGTGTTCTTGGCACAAACTGTCCTATTCCTGCAAAGTGGAACTGGACTTACCAGTTTCAGGTGAAGGATCAAATTGGAAGCTTTTTCTACTTCCCTTCCCTTCATCTTCAGAGAGCTGCTGGTGGATTTGGGGGTTTCATTATAAACAACAGAGCCATCATTCCTATTCCTTTTGATACCCCACATGGGGACATTGTTGTTTTTATTGGAGATTGGTACACCCGCAATCATACGGATTTGAGGAAGGCCCTTGATGATGGAAAAGATCTTGGCATGCCGGATGGTGTTCTCATCAACGGGAAAGGCCCTTACCGATATAACAACACACTTGTTCCTGATGGCATTGATTATGAAACCATTGAAGTTCATCCTGGAAAAACTTACCGACTTCGTGTACATAATGTTGGAGTATCAACAAGTCTGAATTTCAGGATCCAGAGTCATAACTTACTTCTAGCAGAGACAGAGGGGTCTTACACAGTGCAACAGAACTACACTAGCTTAGATATTCATGTTGGACAATCTTATTCTTTTCTGTTAAGCACGGATCAAAATGCAAGTACAGATTACTACATTGTAGCAAGTGCCAGGTTTGTGAATGAATCACGTTGGCAAAGAGTTACTGGAGTTGCTATCTTGCGCTATACAAATTCCAAGGGGAAGGCACGTGGTCCTCTCCCACCTGCTCCTGATGATCAATTTGACAAAACTTACTCAATGAACCAAGCAAGATCCATCAGATGGAATGTATCAGCAAGTGGTGCTCGTCCTAACCCACAAGGGTCTTTCAGATATGGTTCCATCAATGTGACTGATATTTATGTATTGAAAAATAAGCCACTGGAGAAAATCAATGGGAAGCGGCGAGCAACACTCAGTGGAAACTCTTTTGTCAATCCTTCTACTCCAATCAGGCTTGCTGACCAGTACAAATTAAAGGGAGTATACAAGCTTGATTTCCCTACCAAGCCTCTTACAGGATCACCTCGCACAGAAACATCAGTCATTAATGGAACTTATAGGGGATTTATGGAAATTATACTGCAGAACAATGATACTAAGATGCATACCTATCACATGAGTGGATATGCATTTTTTGTTGTCGGGATGGATTTTGGTGATTGGTCTGAGAATAGCAGGGGTACATATAACAAGTGGGATGGAATAGCTCGCACTACAGCACAGGTCTATCCCGGAGCATGGACAGCAATTTTGGTTTCCCTTGACAACGTAGGAGTTTGGAATCTCAGAACAGAAAACCTTGATTCATGGTATCTTGGTCAAGAAACATATGTCAGGGTTGTCAACCCAGAGGTCAATAACAAGACTGAGTTGCCCATTCCAGACAATGCCCTTTTCTGTGGTGCCCTTAGCAAATTGCAGAAGCCTCAAAAGGTTTCTTCAGATGCACCATCAATCAGTCGGAACAAACTGAAGCTGTTCTTCACTTGGCTCATTGTATTCGCCTGGATCCACATTTTCCAGTAA 1779 0.4289 MSSFRALFFFFLINVSLLLTLSSAADPFVSYEFEVSYITASPLGVPQQVIAINNKFPGPIINVTTNNNVAVNVRNKLDESLLIHWSGIQQRRSSWQDGVLGTNCPIPAKWNWTYQFQVKDQIGSFFYFPSLHLQRAAGGFGGFIINNRAIIPIPFDTPHGDIVVFIGDWYTRNHTDLRKALDDGKDLGMPDGVLINGKGPYRYNNTLVPDGIDYETIEVHPGKTYRLRVHNVGVSTSLNFRIQSHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLLSTDQNASTDYYIVASARFVNESRWQRVTGVAILRYTNSKGKARGPLPPAPDDQFDKTYSMNQARSIRWNVSASGARPNPQGSFRYGSINVTDIYVLKNKPLEKINGKRRATLSGNSFVNPSTPIRLADQYKLKGVYKLDFPTKPLTGSPRTETSVINGTYRGFMEIILQNNDTKMHTYHMSGYAFFVVGMDFGDWSENSRGTYNKWDGIARTTAQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRVVNPEVNNKTELPIPDNALFCGALSKLQKPQKVSSDAPSISRNKLKLFFTWLIVFAWIHIFQ 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01285 592 Pfam Multicopper oxidase 35 148 IPR011707 GO:0005507
Gma17g01285 592 Gene3D - 20 147 IPR008972 -
Gma17g01285 592 PANTHER MULTI-COPPER OXIDASE 13 563 IPR045087 -
Gma17g01285 592 Pfam Multicopper oxidase 162 314 IPR001117 -
Gma17g01285 592 Pfam Multicopper oxidase 404 534 IPR011706 GO:0005507|GO:0016491
Gma17g01285 592 Gene3D - 159 352 IPR008972 -
Gma17g01285 592 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 13 563 - -
Gma17g01285 592 SUPERFAMILY Cupredoxins 157 354 IPR008972 -
Gma17g01285 592 SUPERFAMILY Cupredoxins 23 175 IPR008972 -
Gma17g01285 592 Gene3D - 365 563 IPR008972 -
Gma17g01285 592 SUPERFAMILY Cupredoxins 379 552 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01285 Gma-Chr17 11393083 11397566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01285 - - gmx:100798971 1201.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01285 17 11393083 11397566 Gma17g01285 17 11393083 11397566 ECH
Gma17g01285 17 11393083 11397566 Gma05g00535 05 5146140 5150440 GST