Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01227 ATGGGTGTTTTGTGGTGGAAGCTGTTTTTTGCTGCTCTTGCTGGGATTCTCTTCTCAACCCAACATTGTGCTTCCCAAAAAGTTCCGAACTACACATTTATGCACAATGCAACAACAGCACCAGACGTATCATACTACGACTACATCGTAATTGGCGGCGGCACCGCAGGGTGCCCTTTAGCTGCAACACTGTCCCAAAATTACAGCGTATTGCTCCTTGAACGTGGTGGGTCGCCCTACGGCAACCCTAACATCTCCGACTTAGCTGCTTTCGGTGCTGCCCTCTCCGACACCTCCCCTACCTCCCCCGCTCAGCGTTTCATCTCCGAAGACGGTGTCATCAACTCAAGAGCCCGCGTCCTAGGTGGTGGAAGTTGCTTGAACGCTGGCTTTTACACTCGCGCTAGCCCTCAATATGTAAGGGAAGCGGGGTGGGATGGAAGGGCAGTGAATGAGTCGTACGAATGGGTGGAGAAGATAGTGGCGTTTGAACCACAATTGAAGCAGTGGCAGTCAGCTGTGCGGGATGGACTAATAGAGATAGGTGTGGTGCCTAATAATGGCTTCACTTATGACCATATTGATGGGACTAAGGTAGGGGGCACCATCTTTGACCAGAATGGCTTCAGACACACCGCTGCTGATCTTCTGGAATATGCCAAACCCACTGGAATTACTGTGCTTTTGGATGCCACTGTGCATAGGATCTTGTTTAGAGTCAAAGAGGGATCAAAACCAACGGCCCATGGAGTGGTGTTTAGAGATTCATTGGGTGGAAGACACAAAGTGTACCTGAAGGCCGATCCAAGGAACGAGATAATTGTTTCAGCCGGTGCACTTGGAAGCCCACAACTTCTAATGTTGAGTGGAATTGGACCCAGAGAGCACCTTAAAGCCCACAACATCAGAATAACATTGAATCAGCCATTAGTAGGACAGGGAATGACTGACAACCCCATGAACGCCATCTTTGTCCCTTCTCCTGTCCCCGTAGAGGTCTCTCTGATTGAGGTGGTGGGCATCACCAGTTTTGGCAGCTACATTGAAGCTGCCAGTGGTGAAAACTTTGCCGGTGGTTCTCCAAAAGACTACGGAATGTTCTCCCCCAAGATTGGGCAACTCTCCACGGTGCCTCCAAAGGAAAGGACCCCAGAGGCCCTGGCCAAGGCAACAGAACTGATGGAAACTCTAGAACAAGCAGCCTTCAGAGGAGGATTCATATTGGAAAAAATCATGGGTCCAATCTCAAGCGGGCATTTGGAGCTCCGAACCCGCGACCCGAACGACAACCCATCAGTGACCTTCAACTACTTCCAGGACCCTCGAGACTTGCAGCGATGCGTGCAGGGCCTGAGCACCGTGGAGAAGATAATCGAGTCCAAAGCTTTCTCTCCCTTCAGATACCCCAACATGCCAGTGCCCGTTCTGCTCAACCTGACCGCAAGTGCCCCCGTTAACTTGTTGCCCAAGCACACCAATTCTTCACTTTCTTTGGAACAGTATTGCAGAGACACTGTCATGACCATTTGGCACTACCACGGTGGCTGCCAAGTAGGGAAGGTTCTTGATAGGGACTACAAGCTTCTTGGTGTGGATGCACTGCGTGTTATTGATGGCTCCACCTTTAACTACTCTCCTGGAACTAATCCTCAGGCCACTGTTATGATGCTTGGCAGGTATATGGGAGTGAAAATATTGAGCGAGAGACTAGGTGGTGCGGCTGCTGCTGCTGAAACAGAGCAATAA 1746 0.5057 MGVLWWKLFFAALAGILFSTQHCASQKVPNYTFMHNATTAPDVSYYDYIVIGGGTAGCPLAATLSQNYSVLLLERGGSPYGNPNISDLAAFGAALSDTSPTSPAQRFISEDGVINSRARVLGGGSCLNAGFYTRASPQYVREAGWDGRAVNESYEWVEKIVAFEPQLKQWQSAVRDGLIEIGVVPNNGFTYDHIDGTKVGGTIFDQNGFRHTAADLLEYAKPTGITVLLDATVHRILFRVKEGSKPTAHGVVFRDSLGGRHKVYLKADPRNEIIVSAGALGSPQLLMLSGIGPREHLKAHNIRITLNQPLVGQGMTDNPMNAIFVPSPVPVEVSLIEVVGITSFGSYIEAASGENFAGGSPKDYGMFSPKIGQLSTVPPKERTPEALAKATELMETLEQAAFRGGFILEKIMGPISSGHLELRTRDPNDNPSVTFNYFQDPRDLQRCVQGLSTVEKIIESKAFSPFRYPNMPVPVLLNLTASAPVNLLPKHTNSSLSLEQYCRDTVMTIWHYHGGCQVGKVLDRDYKLLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGVKILSERLGGAAAAAETEQ 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01227 581 Gene3D - 163 508 - -
Gma17g01227 581 PANTHER OSJNBA0019K04.7 PROTEIN 17 570 - -
Gma17g01227 581 Gene3D - 46 558 IPR036188 -
Gma17g01227 581 SUPERFAMILY FAD/NAD(P)-binding domain 44 568 IPR036188 -
Gma17g01227 581 Pfam GMC oxidoreductase 46 319 IPR000172 GO:0016614|GO:0050660
Gma17g01227 581 SUPERFAMILY FAD-linked reductases, C-terminal domain 315 515 - -
Gma17g01227 581 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Gma17g01227 581 PIRSF Alcohol_oxidase 21 576 IPR012132 GO:0050660
Gma17g01227 581 ProSitePatterns GMC oxidoreductases signature 2. 278 292 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01227 Gma-Chr17 10809714 10814525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01227 1 569 Miscellaneous Gene Families AT5G51950 57.465 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01227 - - gmx:100780028 1173.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01227 17 10809714 10814525 Gma17g01227 17 10809714 10814525 ECH
Gma17g01227 17 10809714 10814525 Gma05g00473 05 4501083 4509627 GST