Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01222 ATGTCCATGGATTCTATGGCCACTTCCATCGGAGTCTCGGTCCCCGTGCTCCGCTTCCTCCTCTGCTTCGCCGCCACCGTGCCCCTCAGCTTCCTCTGCCGCTTCCTCCCCCGCGGCCTCCCCAAGCACCTCTACTCCTCCGTCGTCGGCGTCGCCCTCTCCTACCTCTCCTTCGGCTTCTCCTCCAACCTCCACTTCCTCGTCCCCATGTTCCTTGGCTACGCCTCCATGCTCCTCTATCGTCCTCGATGCGGCATCCTCACCTTCTTCCTCGGATTTGGCTACCTCATTGGCTGCCACGTGTATTACATGAGCGGTGATGCATGGAAGGAAGGTGGCATCGATGCCACTGGGGCTTTAATGGTTTTGACGCTCAAGGTTATCTCCTGTGCGGTTAATTACAACGATGGTTTGCTGAAAGAGGAGGGTTTGCGTGAGGCTCAGAAGAAGTACCGTTTGATCAAGTTGCCTTCCTTGATTGAGTACATTGGTTACTGCCTCTGCTGTGGAAGTCACTTTGctggtcctgtttatgaaatgaaggattatcttgattggactgaaggaaaagggATTTGGGGCACTGAAGCAAAAGGGCCATCGCCATCACCTTACGGGGCGACCCTTCGGGCTCTTCTCCAAGCTGGTTTTTGCATGGCCATGTATTTAAACCTCGTGCCTCATTTTCCTTTGTCCAAATTTACTGATCCTACCTACCATGAATGGTGTTTCTGGAAAAAATTAAGTTACCAGTATATGTCTGGCTTTACTGCACGCTGGAAGTATTATTTCATCTGGTCAATTTCAGAAGCTTCTATTATCATCTCTGGCCTGGGGTTCAGTGGCTGGACTGATTCGTCCCCACCTAAGCCTCGCTGGGACCGGGCCAAAAATGTTGATATaattggtgttgagtttgcaaagagtgcagttactattccagctgtgtggaatattcaagtcagcacctggcttcgtcattATGTTTACGAAAGGCTTATTCAGACTGGGAAGAAACCAGGTTTCTTTCAGCTACTTGCCACTCAGACCGTTAGTGCCGTTTGGCATGGCTTGTACCCTGGATACATAATATTCTTTGTTCAGTCAGCATTAATGATTGCTGGTTCCAGAGTGATTTACAGATGGCAGCAAGCCGTGCCTCCGACAATGTCTCTGGTTAAGAATGTGTTGGTGTTTACAAATTTTGCTTATACACTTTTGGTTCTAAATTACTCCTGTGTTGGTTTCATGGTGTTAAGTCTGCATGAAACTCTTGCATCATATGGAAGCGTGTATTACATTGGAACTATTGTTCCTGTTGTTATGATTCTTCTTGGTAAAGATAATGCGGCAGAAGGGTTTCTAGTTCCCACAGGTTTTCTGGCCCTGGTTTTCAACATTGTTGTAACAGCTCCTTTGGTCTTGAAAATGGTTGGGCGCTTTCATACTCTTGGCTTTAGCATTGAATTGTATTTCTGTGATAAGAAACTTCTTGTTGGCAGTATTATTTCCCAGTCGGTTTCTACATTCTCTCTGTTTTTTTCCTTCCACCGACTGCTAGTTTTCGTTAACACCACTAACTTCAAGAAGAGGCTTTTGATTTTGGGCAAGTCAAGGTTCTTTCTTCTTTCCTCGTTTTCCCTCCCTCCAAGGGAAGAACCTCTTCAGATACACCCTTTTTGCCCTGAGAAAACATTAGACCACACCGCACTCTTCCATTTCACCCATAAAGCTTGGACTGCAGTCAAAGAGTCAACGATCCACAACATGTTTTCGAGGGGCAGAGGGAGTGACATTGGTGGCCATGGCAACACAAACGTGGCTGAATGGGAATTAAGGCCAGGAGGAATGGTCGTGCAGAAACGTAACTCGGATTTGAATCAAAATTCTGCATCTAAATTCACCATCAAAGTCAAAGTGAAGTATGGCTCATCCTATCACCAAATTCAAATCAGTTCTCATGCAAGTTTCGGGGAATTGAAGAAAATGTTAACAGAACCTACAGGATTGCACGTTCAGGATCAGAAGTTGATTTACAAGAAAAAAGAGAGAGACTCAAAGTCATATCTTGATGTTGAGAGGGTCAAAGATGGATCAAAATTGGTGCTTGTTGTGGACATTGAGAGTAGAGAAAGAAGGATACTTGAGACGTTAAAAATTGCTAAGGAGAAGACATCAAAATCCTTGACAGAAATAAAGGTGGAGGTTGATAAACTTGCCAAGAAGGTTGCAGCTTTGGAGGCTGCTGCTTCCACAGGTGGGGTTATAGCAGAGTTAGATATAGAGACTTTGACCGAGAATTTGATGAGAACATTGATTGCATTGGATGAAATTAATGGTGAGGGTGAACTGAAATTGCAGAGAAGAGAGCAGGTTAGGAGAGTTCAGAAACACATTGAGACTCTAGATATGTTGAGGATGGCAAGGGAAAACTCAATTTCTCTGAAAAATGAAGAGAAAAACTTGGCACGTGAGAGCAAGGTGCATTGTGGTGATCACATGCAGGGGAGACAGGGAAATCCTAAGAAGCAGCAACCGTTAAAACATTCTGAATCAGTTGTAGTCACAACAAAATGGGAAACTTTTGATTGA 2592 0.4279 MSMDSMATSIGVSVPVLRFLLCFAATVPLSFLCRFLPRGLPKHLYSSVVGVALSYLSFGFSSNLHFLVPMFLGYASMLLYRPRCGILTFFLGFGYLIGCHVYYMSGDAWKEGGIDATGALMVLTLKVISCAVNYNDGLLKEEGLREAQKKYRLIKLPSLIEYIGYCLCCGSHFAGPVYEMKDYLDWTEGKGIWGTEAKGPSPSPYGATLRALLQAGFCMAMYLNLVPHFPLSKFTDPTYHEWCFWKKLSYQYMSGFTARWKYYFIWSISEASIIISGLGFSGWTDSSPPKPRWDRAKNVDIIGVEFAKSAVTIPAVWNIQVSTWLRHYVYERLIQTGKKPGFFQLLATQTVSAVWHGLYPGYIIFFVQSALMIAGSRVIYRWQQAVPPTMSLVKNVLVFTNFAYTLLVLNYSCVGFMVLSLHETLASYGSVYYIGTIVPVVMILLGKDNAAEGFLVPTGFLALVFNIVVTAPLVLKMVGRFHTLGFSIELYFCDKKLLVGSIISQSVSTFSLFFSFHRLLVFVNTTNFKKRLLILGKSRFFLLSSFSLPPREEPLQIHPFCPEKTLDHTALFHFTHKAWTAVKESTIHNMFSRGRGSDIGGHGNTNVAEWELRPGGMVVQKRNSDLNQNSASKFTIKVKVKYGSSYHQIQISSHASFGELKKMLTEPTGLHVQDQKLIYKKKERDSKSYLDVERVKDGSKLVLVVDIESRERRILETLKIAKEKTSKSLTEIKVEVDKLAKKVAALEAAASTGGVIAELDIETLTENLMRTLIALDEINGEGELKLQRREQVRRVQKHIETLDMLRMARENSISLKNEEKNLARESKVHCGDHMQGRQGNPKKQQPLKHSESVVVTTKWETFD 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01222 863 Coils Coil 805 825 - -
Gma17g01222 863 MobiDBLite consensus disorder prediction 830 852 - -
Gma17g01222 863 ProSiteProfiles BAG domain profile. 728 806 IPR003103 GO:0051087
Gma17g01222 863 SUPERFAMILY BAG domain 692 806 IPR036533 GO:0051087
Gma17g01222 863 SMART BAG_1 728 806 IPR003103 GO:0051087
Gma17g01222 863 Coils Coil 729 749 - -
Gma17g01222 863 SUPERFAMILY Ubiquitin-like 628 707 IPR029071 -
Gma17g01222 863 PANTHER PORCUPINE 1 447 - -
Gma17g01222 863 Gene3D - 634 704 - -
Gma17g01222 863 Gene3D BAG domain 706 810 IPR036533 GO:0051087
Gma17g01222 863 Pfam BAG domain 731 804 IPR003103 GO:0051087
Gma17g01222 863 MobiDBLite consensus disorder prediction 838 852 - -
Gma17g01222 863 Pfam MBOAT, membrane-bound O-acyltransferase family 102 402 IPR004299 -
Gma17g01222 863 ProSiteProfiles Ubiquitin domain profile. 634 710 IPR000626 GO:0005515
Gma17g01222 863 PANTHER MEMBRANE BOUND O-ACYL TRANSFERASE, MBOAT-RELATED 1 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01222 Gma-Chr17 10745854 10753950 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01222 K13519 - gmx:100778962 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01222 17 10745854 10753950 Gma17g01222 17 10745854 10753950 ECH
Gma17g01222 17 10745854 10753950 Gma05g00467 05 4445057 4447036 GST