Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01205 ATGGGTGAGGATACACAATGGctccaattaagTACAAGTTTACGAATTATTCCAACTCACTATACGAAGACAGGAAAAGCTTCTTTGAAGTTCCAGTTGATCAATCAACGTGCAGATTTCTCCTTTGGGCTATTTTCAGGCAGACTGTTAAATCCTAAGCTTGTGGCAGTTTCCAATTTCATATCATTTGTCAATCCTAAAGTGCCTCTGTATCCACGACTTGCTCAGGGGAAGTCTTGGGATGAAATGACAGTTACATGGACTAGTGGATATGACATAAATGAAGCTATACCTCGTAACAGCATGTGTGGTTCACCTGCACAGACTGTTGGTTGGCGTGACCATGGTTTCATACACACAAGTTTTCTCAAAAACCTTTGGCCAAATTTAGTGTATACATATCGATTAGGGCATCTATTGTCAGATGGTTCTTATATTTGGAGCAAGAAATATTCATTCAAGTCATCACCTTATCCTGGACAGGACTCACAGCAACGTGTTATCATATTTGGTGACATGGGGAAGgtgaaaatgaagtcttacacggagtcttttgatttatggaatgatgtggaagaggattatgaagatattcggacagattgcttggtatcactaacaagGTATGCAACGGATTATGGCATGTTTCGCTTCTGCATAGCTGACACTGAACATGATTGGAGGGAAGGATCAGAACAATACAAATTCATCGAGCATTGCCTTGCAACAGTAGACAGACAGAAACAACCCTGGTTGATTTTTGCTGCTCACCGTGTGCTTGGATATTCATCTGATTTTTGGACATGCCCCATTTATCAGTCTCGCTATTCCGGCGTTGTGAATGGAACAATTCATGTTGTTGCTGGAGGAGCAGGAAGCCACTTGTCAAACTTCAGCCAAGTAACCCCAAAGTGGAGTCTTTACAGAGACTACGACTTCGGGTTTGTCAAGTTGACAGCATTCGATCATTCATCTCTCCTCTTTGAATACAAGAAAAGCAGTGATGGAAAGGTCTACGATTCTTTTACCATTTCAAGGGATTACAAAGATGTCTTGGCCTGTGTGGATGATAGCTGTGAAGCAACCACTTCAGCAACTTGA 1101 0.3787 MGEDTQWLQLSTSLRIIPTHYTKTGKASLKFQLINQRADFSFGLFSGRLLNPKLVAVSNFISFVNPKVPLYPRLAQGKSWDEMTVTWTSGYDINEAIPRNSMCGSPAQTVGWRDHGFIHTSFLKNLWPNLVYTYRLGHLLSDGSYIWSKKYSFKSSPYPGQDSQQRVIIFGDMGKVKMKSYTESFDLWNDVEEDYEDIRTDCLVSLTRYATDYGMFRFCIADTEHDWREGSEQYKFIEHCLATVDRQKQPWLIFAAHRVLGYSSDFWTCPIYQSRYSGVVNGTIHVVAGGAGSHLSNFSQVTPKWSLYRDYDFGFVKLTAFDHSSLLFEYKKSSDGKVYDSFTISRDYKDVLACVDDSCEATTSAT 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01205 366 Gene3D - 268 350 IPR029052 -
Gma17g01205 366 PANTHER PURPLE ACID PHOSPHATASE 20 98 - -
Gma17g01205 366 PANTHER PURPLE ACID PHOSPHATASE 268 365 - -
Gma17g01205 366 PANTHER PURPLE ACID PHOSPHATASE 99 179 - -
Gma17g01205 366 PANTHER PURPLE ACID PHOSPHATASE 209 268 - -
Gma17g01205 366 SUPERFAMILY Purple acid phosphatase, N-terminal domain 47 157 IPR008963 GO:0003993|GO:0046872
Gma17g01205 366 Pfam Iron/zinc purple acid phosphatase-like protein C 282 341 IPR025733 -
Gma17g01205 366 Gene3D - 177 267 IPR029052 -
Gma17g01205 366 SUPERFAMILY Metallo-dependent phosphatases 180 357 IPR029052 -
Gma17g01205 366 PANTHER PURPLE ACID PHOSPHATASE-RELATED 20 98 - -
Gma17g01205 366 PANTHER PURPLE ACID PHOSPHATASE-RELATED 268 365 - -
Gma17g01205 366 PANTHER PURPLE ACID PHOSPHATASE-RELATED 99 179 - -
Gma17g01205 366 PANTHER PURPLE ACID PHOSPHATASE-RELATED 209 268 - -
Gma17g01205 366 Pfam Fn3-like domain from Purple Acid Phosphatase 19 65 IPR040974 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01205 Gma-Chr17 10597382 10602116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01205 209 344 Miscellaneous Gene Families AT1G13900 24.324 3.63e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01205 K22390 - gmx:100814531 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00450 05 4287271 4292861 Gma17g01205 17 10597382 10602116 ECH
Gma17g01205 17 10597382 10602116 Gma17g01205 17 10597382 10602116 ECH
Gma17g01205 17 10597382 10602116 Gma05g00450 05 4287271 4292861 GST