Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01161 ATGGACTTCGACTTCAGGACTAGTTTTCATTCTGTCAAGCACCTCTCTGCTGTGCAAGCGGCTAGACTTCACTCTGTTCCTGTGCTCTGCAGCAATTTCGAAGAGGAGCATTGCTCTGCCCTAAAAAATGTGGTTTGTCCCGTATGTGAAGAAAATATAGGGAAGGATGCAATCATGCAATTTACACATTCAAGCTCTCGAAGGTGGGCGTGGAAGCCTGAGAAATCTAGCATCTGGCCTGGTAACTCAGCAATGCTTGGCAAGAAGCTGGCCACCAGGGGAAACAAACAAGAATCAATAACTGATCCACTTTTGTCACCATTTATCTGCAACGTGCCTTTTCCAAAGTCTAACAATTTCCATCCAGATGAAAACTCCAGGTCCAACAATAAGGATATAGACATTCCTAATGCAAAAAGGACTAGCACAGATGCACCTGATAAAGGTGATGAGAAGGATCAACAAGAGAGAAGGCTGAAGGCAGCTTTTGTTCAACAGTTGGTATTGTCAACCATATTCGAGTAA 525 0.4381 MDFDFRTSFHSVKHLSAVQAARLHSVPVLCSNFEEEHCSALKNVVCPVCEENIGKDAIMQFTHSSSRRWAWKPEKSSIWPGNSAMLGKKLATRGNKQESITDPLLSPFICNVPFPKSNNFHPDENSRSNNKDIDIPNAKRTSTDAPDKGDEKDQQERRLKAAFVQQLVLSTIFE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01161 174 Pfam Drought induced 19 protein (Di19), zinc-binding 24 63 IPR008598 -
Gma17g01161 174 MobiDBLite consensus disorder prediction 125 158 - -
Gma17g01161 174 Pfam Stress-induced protein Di19, C-terminal 94 172 IPR027935 -
Gma17g01161 174 PANTHER PROTEIN DEHYDRATION-INDUCED 19 26 173 IPR033347 -
Gma17g01161 174 MobiDBLite consensus disorder prediction 119 158 - -
Gma17g01161 174 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 5 26 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01161 Gma-Chr17 10120443 10125744 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01161 - - gmx:100801801 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01161 17 10120443 10125744 Gma17g01161 17 10120443 10125744 ECH
Gma17g01161 17 10120443 10125744 Gma05g00399 05 3755114 3759837 GST
Gma17g01161 17 10120443 10125744 Gma04g01829 04 48399077 48403638 PCT
Gma17g01161 17 10120443 10125744 Gma06g01581 06 15356822 15361004 PCT
Gma04g01829 04 48399077 48403638 Gma17g01161 17 10120443 10125744 PCT
Gma06g01581 06 15356822 15361004 Gma17g01161 17 10120443 10125744 PCT