Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01155 ATGGAGTCAGATGAAGACGATTTTGTTTTCTACGGAACGCCGATAGAGCGTGAGGACGATTCAATCAGTCGCAAGAAGAAGGCCATTGCTGAGTCCTCAGGTCAGCTCCGAGCTCTCCCTGCTTGGAAGCAAGAGGTTAGAGATGAGGAAGGGCGGAGAAGATTCCATGGAGCATTTACAGGAGGTTATTCTGCGGGTTACTATAATACAGTGGGCTCAAAGGAAGGGTGGGCACCTCAGTCATTTAAATCATCAAGGAAGAGCAGGGCTGAATTTAAAGAGCAGAACATACTGAATTTTCTTGATGAAGATGAGAAAACTGAATTGGAAGGTTGTTTTTTGGGGACAACTTCACAGTTTGACACATTTGGTTTCACAGCTGCTGAAATTGCTCGCAAACAAGCTGAGAAGGAACAGAAACAGAGGCCATCCATAATTCCTGGACCTGCTCCTGATGAAATAGTTGTTCCAGCCACTGAGTCTGTTGGGGTAAAACTGCTCATGAAGATGGGATGGAGTCGTGGTCGCTCAATCAAGGATTCACATTCTGAGGCACTGTATGATGCTAGAAGACAGGCCCGTAGAGCTTTCTTAGCATTTTCTTCTGATGATCCAAAATTGAAGATTACTGGGTCTGAGCCCATTGAGGGTGATGTTGAAATTTTTCCTGAGGAGCCTGTGAATGGCGATGCTCAGTTTTCTAAGAGCACACCGGTTTACGTACTCAACCCAAAGCAAGACCTGCATGGATTAGGTTTTGATCCTTATAAGCATGCTCCTGAGTTTAGAGAGAAAAAAAGATCACGCTTAGCCAGCAAGGGGGGAGGACCTGGCTATAGCAAAAACTTCTCCACCAGAGACAGTCTTTTTGGTTTGAAATCAGGAAAGGCTGCCCCTGGTTTTGGTATTGGAGCTCTTGAGGAGCTTGATGTGGAGGATGAGGATGTCTATGCCACTGGTTATGAATTTGAAGATGCTTATGTTCAAGAAGTTGAAGAACCTTCAACGTTGAGATTAGAAAACCAGAGAACGAAAGAGCAGAAGGACCAGGGTGATCTGCGTGGTTTTAGAGTTGCATCCAATTCTGACTTTAAAATGGAAAGATTCGAGGCTCCTCTGATTCCCAAGGATTTTGTGCCCCACCATGAATTTTCTGGACCTCTCAACATTAACCGCAAGAGCTGTGAAGTTACTCCACCAGATGTTCCTCCTCCTGGGGATGGGAATTTAAAACTATTAATTGAGGGGGTTGCAAATCTGGTAGCTAAATGTGGTAAATTATATGAGGATTTATCAAGAGAAAAGAATCAATCAAATCCATTGTTTAATTTTCTTTCTGGAGGAACTGGCCATGAATATTATGCAAGGAAATTGTGGGAGGCACAACAGAAACACAAGACTAGTCGGCAATTGGATGGAAAAATGCCTCCCAGTGTGCAGAGGCTAACAGCTGAGAGTCGAGGCCAGATCCTAGGGGAAAAACCTCTAGAAAAAAGTTCCCAAGATCTATCCTCATCTGTTTCTTCTACAGATATTCATCTCCAATTTAATCTTACTGATACATTTACTGAGTCTGCATCACTTAGTGAGTTAGTGAATGTGGAAAAGCCTTTCAAAGATGATCCTACAAAGCAAGAAAGATTTGAGCAGTTTCTTAAGGAGAAATATAAAGGGGGATTACGCTCTGCTAGTTCTAGTTTAGCTAGTGATATGTCAGAAGCTGCTCGTGCTCAAGAGAGACTAAGTTTTGAGGCTGCAGCTGAGGCAATAGAAAAGGGACGACAAGGCAGGGGAAGCAAGCCTTTAATTCCATCTTCCATGGATTTTATCCCAGGTGGTGTTATGCAGTTTACTTCTGGTGAAGTAAAGCCAAAGAAAGACCTGCTAGCTGAAGATATTTTGAAGAAGAAAATGTACCCTAAGAGGGAAGAGTTTCAATGGCGCCCTTCTCCTCTTCTGTGCAAACGCTTTGATCTTATTGATCCATATATGGGGAAGCCGCCACCTGCTCCACGGATTAGGAGTAAGATGGATACCTTGATTTTTACATCAGATTCAGTCAAAGGTACCAAAGTGGACGGGCCTGTTACTTCAAAGAAAGACATCTCATCTTTGCAACAACCTACTAATAAAGACATAACCAAAAGTATTACTGAAAATGAAACTGAAGAGGATGTGGAAGTCGAAAATATTGAAAGGCCAGTTGACCTATACAAGGCTATTTTCTCCGATGATTCAGATGATGAAGGGGAAGACCCTAGCAATAGGAGAGTAGAGAATCAAGAAAAGAAAGCTGAAGTAGCTAATACAGCATTGAGCCGTTTGATTGCTGGTGATTTTCTTGAATCATTGGGCAAGGAACTAGGAATTGAGGTTCCTCCTGATATGCCTTACCCTACGCAAAAGTCCAGGAATGTTGCACATCAGAAAGACATTGTTAATGAAGATGCAAGAACCGACATCCTAAAGAGTGAAAACAACAGTGTGATGTCCTTAAATCATGATTTGCCATATGATCAGCAGCACATTGCTCATGATTGTGAACCATCAAAAGGTGACACCATTGATGGAAATATGCTTGAGAGCGGTAATAACAAAACCAAGGGAACCACCAGCCAAGACAATGACAGCAGTTCAGAAGAAGAAAGGAGCCAAAAACGATCTAATAGGGAAAAATATGATGAGTCTAGGAAAGATAAAACCCCTGTAACACGTGGCCGGGATTATAGCAGCAGTTCTTCATTAGAAGAGGAAAGGAGCCGAAAACGGTCCAGACATCAACGGCATAAGAGGCATGATGCAGGAAGTCATTCATCCAGTGATGATGACAGAAGAGATAGACACAGTTCAAGGTCAAAAGGGAGAAGGAAAGGTTCTTCCCGAGAAAAAAGCAGGAGTGAAAAACACTCAAAACGTCACAAGCACAGAAAGCATGAATCTCCAAATAGATCCTCTCGTTATAGCAATGAGAAAGACAGTTCACATTCCAGAAAAGAGAAAAGGCGGAGGGAATGA 3015 0.4272 MESDEDDFVFYGTPIEREDDSISRKKKAIAESSGQLRALPAWKQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWAPQSFKSSRKSRAEFKEQNILNFLDEDEKTELEGCFLGTTSQFDTFGFTAAEIARKQAEKEQKQRPSIIPGPAPDEIVVPATESVGVKLLMKMGWSRGRSIKDSHSEALYDARRQARRAFLAFSSDDPKLKITGSEPIEGDVEIFPEEPVNGDAQFSKSTPVYVLNPKQDLHGLGFDPYKHAPEFREKKRSRLASKGGGPGYSKNFSTRDSLFGLKSGKAAPGFGIGALEELDVEDEDVYATGYEFEDAYVQEVEEPSTLRLENQRTKEQKDQGDLRGFRVASNSDFKMERFEAPLIPKDFVPHHEFSGPLNINRKSCEVTPPDVPPPGDGNLKLLIEGVANLVAKCGKLYEDLSREKNQSNPLFNFLSGGTGHEYYARKLWEAQQKHKTSRQLDGKMPPSVQRLTAESRGQILGEKPLEKSSQDLSSSVSSTDIHLQFNLTDTFTESASLSELVNVEKPFKDDPTKQERFEQFLKEKYKGGLRSASSSLASDMSEAARAQERLSFEAAAEAIEKGRQGRGSKPLIPSSMDFIPGGVMQFTSGEVKPKKDLLAEDILKKKMYPKREEFQWRPSPLLCKRFDLIDPYMGKPPPAPRIRSKMDTLIFTSDSVKGTKVDGPVTSKKDISSLQQPTNKDITKSITENETEEDVEVENIERPVDLYKAIFSDDSDDEGEDPSNRRVENQEKKAEVANTALSRLIAGDFLESLGKELGIEVPPDMPYPTQKSRNVAHQKDIVNEDARTDILKSENNSVMSLNHDLPYDQQHIAHDCEPSKGDTIDGNMLESGNNKTKGTTSQDNDSSSEEERSQKRSNREKYDESRKDKTPVTRGRDYSSSSSLEEERSRKRSRHQRHKRHDAGSHSSSDDDRRDRHSSRSKGRRKGSSREKSRSEKHSKRHKHRKHESPNRSSRYSNEKDSSHSRKEKRRRE 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01155 1004 SMART surpneu2 411 463 IPR000061 GO:0003723|GO:0006396
Gma17g01155 1004 Pfam Surp module 413 460 IPR000061 GO:0003723|GO:0006396
Gma17g01155 1004 SUPERFAMILY Surp module (SWAP domain) 393 463 IPR035967 GO:0003723|GO:0006396
Gma17g01155 1004 MobiDBLite consensus disorder prediction 743 764 - -
Gma17g01155 1004 MobiDBLite consensus disorder prediction 857 874 - -
Gma17g01155 1004 MobiDBLite consensus disorder prediction 789 812 - -
Gma17g01155 1004 Gene3D Surp module 358 469 IPR035967 GO:0003723|GO:0006396
Gma17g01155 1004 Pfam Protein of unknown function (DUF1604) 39 110 IPR011666 GO:0006397
Gma17g01155 1004 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 880 1003 - -
Gma17g01155 1004 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 1 892 - -
Gma17g01155 1004 MobiDBLite consensus disorder prediction 934 949 - -
Gma17g01155 1004 MobiDBLite consensus disorder prediction 966 981 - -
Gma17g01155 1004 MobiDBLite consensus disorder prediction 982 997 - -
Gma17g01155 1004 MobiDBLite consensus disorder prediction 824 1004 - -
Gma17g01155 1004 PANTHER BNACNNG56020D PROTEIN 880 1003 - -
Gma17g01155 1004 PANTHER BNACNNG56020D PROTEIN 1 892 - -
Gma17g01155 1004 ProSiteProfiles SURP motif repeat profile. 413 457 IPR000061 GO:0003723|GO:0006396
Gma17g01155 1004 MobiDBLite consensus disorder prediction 743 765 - -
Gma17g01155 1004 MobiDBLite consensus disorder prediction 875 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01155 Gma-Chr17 10045437 10057794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01155 K13123 - gmx:100796934 1605.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01155 17 10045437 10057794 Gma17g01155 17 10045437 10057794 ECH
Gma17g01155 17 10045437 10057794 Gma05g00145 05 1415983 1427598 GST